RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 MAPK8IP3Q9UPT6 1336 aa10.46□□□□□ -0.73
SRGAP3-211ENST00000518265 JCADQ9P266 1359 aa10.46□□□□□ -0.73
SRGAP3-211ENST00000518265 SHANK3Q9BYB0 1731 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 FOXK1P85037 733 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 DDX12PQ92771 950 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 PHF12Q96QT6 1004 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 KIF24Q5T7B8 1368 aa10.46□□□□□ -0.74
SRGAP3-211ENST00000518265 EVA1CP58658 441 aa10.45□□□□□ -0.74
SRGAP3-211ENST00000518265 DCTN1Q14203 1278 aa10.45□□□□□ -0.74
SRGAP3-211ENST00000518265 TOM1L2Q6ZVM7 507 aa10.45□□□□□ -0.74
SRGAP3-211ENST00000518265 THUMPD2Q9BTF0 503 aaKnown RBP10.45□□□□□ -0.74
SRGAP3-211ENST00000518265 NWD2Q9ULI1 1742 aa10.45□□□□□ -0.74
SRGAP3-211ENST00000518265 TMPOP42166 694 aaKnown RBP10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 RBM10P98175 930 aaKnown RBP10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 MEGF6O75095 1541 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 ZBED9Q6R2W3 1325 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 A0A0U1RQG5 324 aaPredicted RBP10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 RIPK4P57078 832 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 PLPP6Q8IY26 295 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 COG6Q9Y2V7 657 aa10.44□□□□□ -0.74
SRGAP3-211ENST00000518265 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
SRGAP3-211ENST00000518265 ABCC6O95255 1503 aa10.43□□□□□ -0.74
SRGAP3-211ENST00000518265 KDRP35968 1356 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 PTGDRQ13258 359 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 MEX3CQ5U5Q3 659 aaKnown RBP10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 TRIM35Q9UPQ4 493 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 PKD1L3Q7Z443 1732 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 MCM10Q7L590 875 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
SRGAP3-211ENST00000518265 SCN11AQ9UI33 1791 aa10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 NFE2L2Q16236 605 aa10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 WWC1Q8IX03 1113 aa10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
SRGAP3-211ENST00000518265 NEFMP07197 916 aa10.4□□□□□ -0.74
SRGAP3-211ENST00000518265 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.74
SRGAP3-211ENST00000518265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.74
SRGAP3-211ENST00000518265 SLIT2O94813 1529 aa10.4□□□□□ -0.75
SRGAP3-211ENST00000518265 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 NAP1L5Q96NT1 182 aaPredicted RBP10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 CRB1P82279 1406 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 NCAPD2Q15021 1401 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 EP400Q96L91 3159 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 ITGB4P16144 1822 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 BCL9LQ86UU0 1499 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 MICALL2Q8IY33 904 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
SRGAP3-211ENST00000518265 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 BRWD3Q6RI45 1802 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 AFF2P51816 1311 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 SPATA31A6Q5VVP1 1343 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 SIPA1L3O60292 1781 aaPredicted RBP10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 ZNF530Q6P9A1 599 aaPredicted RBP10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 RAPGEF4Q8WZA2 1011 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 LGR6Q9HBX8 967 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
SRGAP3-211ENST00000518265 TATP17735 454 aaPredicted RBP10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 MPRIPQ6WCQ1 1025 aa10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 USP21Q9UK80 565 aa10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 C2orf72A6NCS6 295 aa10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 ZNF330Q9Y3S2 320 aaPredicted RBP10.37□□□□□ -0.75
SRGAP3-211ENST00000518265 LRRC37A3O60309 1634 aa10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 UNC5CLQ8IV45 518 aa10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 FBXO41Q8TF61 875 aa10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 GLI3P10071 1580 aa10.36□□□□□ -0.75
SRGAP3-211ENST00000518265 DOT1LQ8TEK3 1739 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 IL2RBP14784 551 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 SSTR3P32745 418 aaPredicted RBP10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 PLEKHO1Q53GL0 409 aaPredicted RBP10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 IL17REQ8NFR9 667 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 MAP3K5Q99683 1374 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 OVOS2A0A0G2JMS6 1433 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 SPATA31A1Q5TZJ5 1347 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
SRGAP3-211ENST00000518265 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
SRGAP3-211ENST00000518265 CYP27B1O15528 508 aa10.34□□□□□ -0.75
SRGAP3-211ENST00000518265 SLFN5Q08AF3 891 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms