RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
CSMD1-203ENST00000518151 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
CSMD1-203ENST00000518151 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
CSMD1-203ENST00000518151 NDFIP2Q9NV92 336 aa9.57□□□□□ -0.88
CSMD1-203ENST00000518151 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
CSMD1-203ENST00000518151 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-203ENST00000518151 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-203ENST00000518151 USP17L3A6NCW0 530 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 USP17L4A6NCW7 530 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 ATP9BO43861 1147 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 BNIP3LO60238 219 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 USP17L2Q6R6M4 530 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 USP17L1Q7RTZ2 530 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 ZNF295-AS1Q8N0V1 137 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 ADAMTS19Q8TE59 1207 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 ZCCHC2Q9C0B9 1178 aaKnown RBP9.56□□□□□ -0.88
CSMD1-203ENST00000518151 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
CSMD1-203ENST00000518151 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
CSMD1-203ENST00000518151 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-203ENST00000518151 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSMD1-203ENST00000518151 FOXK2Q01167 660 aa9.54□□□□□ -0.88
CSMD1-203ENST00000518151 PROSER2Q86WR7 435 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-203ENST00000518151 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
CSMD1-203ENST00000518151 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
CSMD1-203ENST00000518151 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
CSMD1-203ENST00000518151 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
CSMD1-203ENST00000518151 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
CSMD1-203ENST00000518151 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
CSMD1-203ENST00000518151 TEAD4Q15561 434 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 LARGE2Q8N3Y3 721 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 EDARADDQ8WWZ3 215 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-203ENST00000518151 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
CSMD1-203ENST00000518151 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-203ENST00000518151 IGHA1P01876 353 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 ARAFP10398 606 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 EPHA4P54764 986 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 CTBSQ01459 385 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 SAMD5Q5TGI4 173 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
CSMD1-203ENST00000518151 M0R2N6 131 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 MAPTP10636 758 aaKnown RBP9.5□□□□□ -0.89
CSMD1-203ENST00000518151 NOS2P35228 1153 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 GLMNQ92990 594 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
CSMD1-203ENST00000518151 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 ZNF232Q9UNY5 417 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
CSMD1-203ENST00000518151 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 DCDC2BA2VCK2 349 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 PIK3R2O00459 728 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 C2CD2LO14523 706 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 AMPD1P23109 780 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 CLDN10P78369 228 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 TNP2Q05952 138 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 TNS4Q8IZW8 715 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-203ENST00000518151 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-203ENST00000518151 MKL2Q9ULH7 1088 aa9.49□□□□□ -0.89
CSMD1-203ENST00000518151 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
CSMD1-203ENST00000518151 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-203ENST00000518151 ZDHHC1Q8WTX9 485 aa9.48□□□□□ -0.89
CSMD1-203ENST00000518151 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
CSMD1-203ENST00000518151 SHISA8B8ZZ34 492 aa9.47□□□□□ -0.89
CSMD1-203ENST00000518151 ADH6P28332 368 aa9.47□□□□□ -0.89
CSMD1-203ENST00000518151 TXLNAP40222 546 aa9.47□□□□□ -0.89
CSMD1-203ENST00000518151 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
CSMD1-203ENST00000518151 SIX5Q8N196 739 aa9.47□□□□□ -0.89
CSMD1-203ENST00000518151 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
CSMD1-203ENST00000518151 A6NJR5 290 aa9.46□□□□□ -0.9
CSMD1-203ENST00000518151 EML1O00423 815 aa9.46□□□□□ -0.9
CSMD1-203ENST00000518151 CD33P20138 364 aa9.46□□□□□ -0.9
CSMD1-203ENST00000518151 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
CSMD1-203ENST00000518151 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-203ENST00000518151 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.9
CSMD1-203ENST00000518151 EPXP11678 715 aa9.45□□□□□ -0.9
CSMD1-203ENST00000518151 ZNF594Q96JF6 807 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-203ENST00000518151 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
CSMD1-203ENST00000518151 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
CSMD1-203ENST00000518151 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
CSMD1-203ENST00000518151 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
CSMD1-203ENST00000518151 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
CSMD1-203ENST00000518151 RASA1P20936 1047 aa9.44□□□□□ -0.9
CSMD1-203ENST00000518151 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-203ENST00000518151 TBCELQ5QJ74 424 aa9.44□□□□□ -0.9
CSMD1-203ENST00000518151 C1orf53Q5VUE5 145 aa9.44□□□□□ -0.9
CSMD1-203ENST00000518151 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms