RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 PCNTO95613 3336 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 HTRA3P83110 453 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 CDCA7Q9BWT1 371 aaPredicted RBP8.34□□□□□ -1.07
LINC00535-202ENST00000517785 TFCP2L1Q9NZI6 479 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 USP6P35125 1406 aa8.34□□□□□ -1.07
LINC00535-202ENST00000517785 SLIT3O75094 1523 aa8.34□□□□□ -1.08
LINC00535-202ENST00000517785 APLP1P51693 650 aa8.33□□□□□ -1.08
LINC00535-202ENST00000517785 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
LINC00535-202ENST00000517785 PPIP5K1Q6PFW1 1433 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 PRELPP51888 382 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 DNAJC5GQ8N7S2 189 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 ANKK1Q8NFD2 765 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 WDR90Q96KV7 1748 aa8.32□□□□□ -1.08
LINC00535-202ENST00000517785 PIK3C2AO00443 1686 aa8.31□□□□□ -1.08
LINC00535-202ENST00000517785 ABCC6O95255 1503 aa8.31□□□□□ -1.08
LINC00535-202ENST00000517785 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
LINC00535-202ENST00000517785 TRPM1Q7Z4N2 1603 aa8.3□□□□□ -1.08
LINC00535-202ENST00000517785 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
LINC00535-202ENST00000517785 DCAF11Q8TEB1 546 aa8.3□□□□□ -1.08
LINC00535-202ENST00000517785 DDX12PQ92771 950 aa8.3□□□□□ -1.08
LINC00535-202ENST00000517785 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
LINC00535-202ENST00000517785 BCAMP50895 628 aa8.29□□□□□ -1.08
LINC00535-202ENST00000517785 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
LINC00535-202ENST00000517785 CCDC7Q96M83 1385 aa8.29□□□□□ -1.08
LINC00535-202ENST00000517785 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 RGS20O76081 388 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 PDIA6Q15084 440 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 COL23A1Q86Y22 540 aaPredicted RBP8.28□□□□□ -1.08
LINC00535-202ENST00000517785 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
LINC00535-202ENST00000517785 NLRP2Q9NX02 1062 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
LINC00535-202ENST00000517785 IGSF1Q8N6C5 1336 aa8.28□□□□□ -1.08
LINC00535-202ENST00000517785 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.08
LINC00535-202ENST00000517785 SLC27A3Q5K4L6 730 aa8.27□□□□□ -1.09
LINC00535-202ENST00000517785 KLRG1Q96E93 195 aa8.27□□□□□ -1.09
LINC00535-202ENST00000517785 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 IL2RBP14784 551 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 NBR1Q14596 966 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
LINC00535-202ENST00000517785 NMRK2Q9NPI5 230 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 CABP1Q9NZU7 370 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 CCNL1Q9UK58 526 aaPredicted RBP8.26□□□□□ -1.09
LINC00535-202ENST00000517785 LY75O60449 1722 aa8.26□□□□□ -1.09
LINC00535-202ENST00000517785 NFAT5O94916 1531 aa8.25□□□□□ -1.09
LINC00535-202ENST00000517785 TOMM70O94826 608 aa8.25□□□□□ -1.09
LINC00535-202ENST00000517785 ITGBL1O95965 494 aaPredicted RBP8.25□□□□□ -1.09
LINC00535-202ENST00000517785 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
LINC00535-202ENST00000517785 CD2APQ9Y5K6 639 aa8.25□□□□□ -1.09
LINC00535-202ENST00000517785 SPDYE16A6NNV3 312 aaPredicted RBP8.24□□□□□ -1.09
LINC00535-202ENST00000517785 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
LINC00535-202ENST00000517785 NYAP1Q6ZVC0 841 aa8.24□□□□□ -1.09
LINC00535-202ENST00000517785 JMYQ8N9B5 988 aa8.24□□□□□ -1.09
LINC00535-202ENST00000517785 WBP1LQ9NX94 342 aa8.24□□□□□ -1.09
LINC00535-202ENST00000517785 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.24□□□□□ -1.09
LINC00535-202ENST00000517785 LTN1O94822 1766 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 MAP3K7O43318 606 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 SMIM5Q71RC9 77 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 C5P01031 1676 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 TTC21BQ7Z4L5 1316 aa8.23□□□□□ -1.09
LINC00535-202ENST00000517785 NSD2O96028 1365 aa8.22□□□□□ -1.09
LINC00535-202ENST00000517785 HSPA1AP0DMV8 641 aaKnown RBP8.22□□□□□ -1.09
LINC00535-202ENST00000517785 HSPA1BP0DMV9 641 aaKnown RBP8.22□□□□□ -1.09
LINC00535-202ENST00000517785 E2F4Q16254 413 aa8.22□□□□□ -1.09
LINC00535-202ENST00000517785 ANKRD24Q8TF21 1146 aa8.22□□□□□ -1.09
LINC00535-202ENST00000517785 N4BP2Q86UW6 1770 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 NBPF1Q3BBV0 1214 aa8.21□□□□□ -1.1
LINC00535-202ENST00000517785 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 C16orf71Q8IYS4 520 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 LTV1Q96GA3 475 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 CENPJQ9HC77 1338 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.1
LINC00535-202ENST00000517785 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
LINC00535-202ENST00000517785 USP54Q70EL1 1684 aa8.21□□□□□ -1.1
LINC00535-202ENST00000517785 TAF1LQ8IZX4 1826 aa8.2□□□□□ -1.1
LINC00535-202ENST00000517785 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
LINC00535-202ENST00000517785 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
LINC00535-202ENST00000517785 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
LINC00535-202ENST00000517785 TSR3Q9UJK0 312 aaKnown RBP8.2□□□□□ -1.1
LINC00535-202ENST00000517785 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
LINC00535-202ENST00000517785 ARIH1Q9Y4X5 557 aaPredicted RBP8.2□□□□□ -1.1
LINC00535-202ENST00000517785 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
LINC00535-202ENST00000517785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00535-202ENST00000517785 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
LINC00535-202ENST00000517785 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
LINC00535-202ENST00000517785 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
LINC00535-202ENST00000517785 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
LINC00535-202ENST00000517785 TOGARAM1Q9Y4F4 1720 aa8.19□□□□□ -1.1
LINC00535-202ENST00000517785 USP47Q96K76 1375 aa8.19□□□□□ -1.1
LINC00535-202ENST00000517785 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms