RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 KIF3CO14782 793 aa19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 TM4SF1P30408 202 aa19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 DALRD3Q5D0E6 543 aaKnown RBP19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 TTC5Q8N0Z6 440 aa19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 NARFQ9UHQ1 456 aa19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
SCARNA20.5-201ENST00000516991 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
SCARNA20.5-201ENST00000516991 CEP350Q5VT06 3117 aa19.65■□□□□ 0.74
SCARNA20.5-201ENST00000516991 SIPA1L3O60292 1781 aaPredicted RBP19.65■□□□□ 0.74
SCARNA20.5-201ENST00000516991 STARD3NLO95772 234 aa19.64■□□□□ 0.73
SCARNA20.5-201ENST00000516991 TEFQ10587 303 aa19.64■□□□□ 0.73
SCARNA20.5-201ENST00000516991 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
SCARNA20.5-201ENST00000516991 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
SCARNA20.5-201ENST00000516991 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
SCARNA20.5-201ENST00000516991 NFIXQ14938 502 aa19.62■□□□□ 0.73
SCARNA20.5-201ENST00000516991 SCN7AQ01118 1682 aa19.62■□□□□ 0.73
SCARNA20.5-201ENST00000516991 A0A087WZG4 1122 aa19.61■□□□□ 0.73
SCARNA20.5-201ENST00000516991 CHRNA5P30532 468 aa19.61■□□□□ 0.73
SCARNA20.5-201ENST00000516991 C9orf131Q5VYM1 1079 aa19.61■□□□□ 0.73
SCARNA20.5-201ENST00000516991 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
SCARNA20.5-201ENST00000516991 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
SCARNA20.5-201ENST00000516991 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
SCARNA20.5-201ENST00000516991 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
SCARNA20.5-201ENST00000516991 CEMIPQ8WUJ3 1361 aa19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 TOMM70O94826 608 aa19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 IL17REQ8NFR9 667 aa19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 BCL2L12Q9HB09 334 aa19.59■□□□□ 0.73
SCARNA20.5-201ENST00000516991 SERPINB2P05120 415 aa19.58■□□□□ 0.72
SCARNA20.5-201ENST00000516991 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
SCARNA20.5-201ENST00000516991 RNF181Q9P0P0 153 aa19.58■□□□□ 0.72
SCARNA20.5-201ENST00000516991 NUDCQ9Y266 331 aa19.58■□□□□ 0.72
SCARNA20.5-201ENST00000516991 SBF1O95248 1867 aa19.58■□□□□ 0.72
SCARNA20.5-201ENST00000516991 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
SCARNA20.5-201ENST00000516991 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
SCARNA20.5-201ENST00000516991 ZC3H4Q9UPT8 1303 aaKnown RBP19.56■□□□□ 0.72
SCARNA20.5-201ENST00000516991 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SCARNA20.5-201ENST00000516991 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
SCARNA20.5-201ENST00000516991 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
SCARNA20.5-201ENST00000516991 NMRK2Q9NPI5 230 aa19.56■□□□□ 0.72
SCARNA20.5-201ENST00000516991 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
SCARNA20.5-201ENST00000516991 APLP1P51693 650 aa19.55■□□□□ 0.72
SCARNA20.5-201ENST00000516991 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
SCARNA20.5-201ENST00000516991 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
SCARNA20.5-201ENST00000516991 RBM46Q8TBY0 533 aaKnown RBP19.54■□□□□ 0.72
SCARNA20.5-201ENST00000516991 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
SCARNA20.5-201ENST00000516991 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
SCARNA20.5-201ENST00000516991 TTLL6Q8N841 843 aa19.53■□□□□ 0.72
SCARNA20.5-201ENST00000516991 BCORQ6W2J9 1755 aa19.52■□□□□ 0.72
SCARNA20.5-201ENST00000516991 BTBD11A6QL63 1104 aa19.52■□□□□ 0.72
SCARNA20.5-201ENST00000516991 H0YIN7 160 aa19.52■□□□□ 0.72
SCARNA20.5-201ENST00000516991 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
SCARNA20.5-201ENST00000516991 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
SCARNA20.5-201ENST00000516991 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.71
SCARNA20.5-201ENST00000516991 BICDL1Q6ZP65 573 aa19.51■□□□□ 0.71
SCARNA20.5-201ENST00000516991 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
SCARNA20.5-201ENST00000516991 ZNF330Q9Y3S2 320 aaPredicted RBP19.51■□□□□ 0.71
SCARNA20.5-201ENST00000516991 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 LMNB1P20700 586 aa19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 RASSF7Q02833 373 aa19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 TBC1D9BQ66K14 1250 aa19.5■□□□□ 0.71
SCARNA20.5-201ENST00000516991 TIAM2Q8IVF5 1701 aa19.49■□□□□ 0.71
SCARNA20.5-201ENST00000516991 PDE6BP35913 854 aa19.49■□□□□ 0.71
SCARNA20.5-201ENST00000516991 FSTL1Q12841 308 aa19.49■□□□□ 0.71
SCARNA20.5-201ENST00000516991 BRIP1Q9BX63 1249 aa19.49■□□□□ 0.71
SCARNA20.5-201ENST00000516991 TBC1D2BQ9UPU7 963 aa19.49■□□□□ 0.71
SCARNA20.5-201ENST00000516991 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
SCARNA20.5-201ENST00000516991 WDR90Q96KV7 1748 aa19.48■□□□□ 0.71
SCARNA20.5-201ENST00000516991 A1BGP04217 495 aa19.48■□□□□ 0.71
SCARNA20.5-201ENST00000516991 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
SCARNA20.5-201ENST00000516991 CAMTA2O94983 1202 aa19.47■□□□□ 0.71
SCARNA20.5-201ENST00000516991 PRR5LQ6MZQ0 368 aa19.47■□□□□ 0.71
SCARNA20.5-201ENST00000516991 SETDB2Q96T68 719 aa19.47■□□□□ 0.71
SCARNA20.5-201ENST00000516991 NPHP1O15259 732 aa19.46■□□□□ 0.71
SCARNA20.5-201ENST00000516991 DZIP3Q86Y13 1208 aaKnown RBP19.46■□□□□ 0.71
SCARNA20.5-201ENST00000516991 CNBD1Q8NA66 436 aa19.46■□□□□ 0.71
SCARNA20.5-201ENST00000516991 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
SCARNA20.5-201ENST00000516991 KCNQ3O43525 872 aa19.45■□□□□ 0.7
SCARNA20.5-201ENST00000516991 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
SCARNA20.5-201ENST00000516991 ST5P78524 1137 aa19.45■□□□□ 0.7
SCARNA20.5-201ENST00000516991 ZNF652Q9Y2D9 606 aa19.45■□□□□ 0.7
SCARNA20.5-201ENST00000516991 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 NFKBIEO00221 500 aa19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 RGL2O15211 777 aa19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 MCM10Q7L590 875 aa19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
SCARNA20.5-201ENST00000516991 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 LAMB4A4D0S4 1761 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 NEFMP07197 916 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 CLEC4GQ6UXB4 293 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 DICER1Q9UPY3 1922 aaKnown RBP19.43■□□□□ 0.7
SCARNA20.5-201ENST00000516991 SMC1BQ8NDV3 1235 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms