RNA–Protein interactions for RNA: ENST00000516290.1

RNU1-6P-201, Transcript of RNA, U1 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU1-6P, Length 144 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-6P-201ENST00000516290 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 TJP1Q07157 1748 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 QSER1Q2KHR3 1735 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 TSR2Q969E8 191 aaKnown RBP6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 KIF16BQ96L93 1317 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 CAMKK2Q96RR4 588 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 CCDC87Q9NVE4 849 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 STK32BQ9NY57 414 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 MIS18AQ9NYP9 233 aa6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 RTCBQ9Y3I0 505 aaKnown RBP6.12□□□□□ -1.43
RNU1-6P-201ENST00000516290 CYP19A1P11511 503 aaPredicted RBP6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 SSFA2P28290 1259 aa6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 IL6STP40189 918 aaPredicted RBP6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 BRPF1P55201 1214 aaPredicted RBP6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 KIF6Q6ZMV9 814 aa6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 ZNF652Q9Y2D9 606 aa6.11□□□□□ -1.43
RNU1-6P-201ENST00000516290 PTPRCP08575 1304 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 VAMP4O75379 141 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 RPS6KA4O75676 772 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 EIF2S2P20042 333 aaKnown RBP6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 CRKLP46109 303 aaKnown RBP6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 EN1Q05925 392 aaPredicted RBP6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 HSP90AB3PQ58FF7 597 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 DNAJC10Q8IXB1 793 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 CDCA7LQ96GN5 454 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 CHMP4BQ9H444 224 aaKnown RBP6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 TFCP2L1Q9NZI6 479 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 NUP188Q5SRE5 1749 aa6.1□□□□□ -1.43
RNU1-6P-201ENST00000516290 SENP3-EIF4A1A0A087X0R7 540 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 ERVV-1B6SEH8 477 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 GNPATO15228 680 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 KCNQ3O43525 872 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 ZPR1O75312 459 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 SLC4A2P04920 1241 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 HSP90B1P14625 803 aaKnown RBP6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 CANXP27824 592 aaKnown RBP6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 RFC4P35249 363 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 NEXNQ0ZGT2 675 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 ITPK1Q13572 414 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 EZH2Q15910 746 aaKnown RBP6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 TRAPPC3LQ5T215 181 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 SLC16A10Q8TF71 515 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 ARHGAP45Q92619 1136 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 SPINK5Q9NQ38 1064 aaPredicted RBP6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 SMC4Q9NTJ3 1288 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 RCAN3Q9UKA8 241 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 HDAC5Q9UQL6 1122 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 USP16Q9Y5T5 823 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 EP400Q96L91 3159 aa6.09□□□□□ -1.43
RNU1-6P-201ENST00000516290 COL15A1P39059 1388 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 ELL2O00472 640 aaPredicted RBP6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 RARSP54136 660 aaKnown RBP6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 EIF5P55010 431 aaKnown RBP6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 SLC15A2Q16348 729 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 CLEC4GQ6UXB4 293 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 PTF1AQ7RTS3 328 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 DEFB132Q7Z7B7 95 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 LINC00116Q8NCU8 138 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 AKT1S1Q96B36 256 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 SLC4A9Q96Q91 983 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 API5Q9BZZ5 524 aaKnown RBP6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 LRRC4BQ9NT99 713 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 CHPF2Q9P2E5 772 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 UBR3Q6ZT12 1888 aa6.08□□□□□ -1.44
RNU1-6P-201ENST00000516290 A1BGP04217 495 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 MYL6BP14649 208 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 FLIIQ13045 1269 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 FKBP5Q13451 457 aaPredicted RBP6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 INTS5Q6P9B9 1019 aaKnown RBP6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 ANKRD13DQ6ZTN6 518 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 DZIP3Q86Y13 1208 aaKnown RBP6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 PROM2Q8N271 834 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 TSPYL6Q8N831 410 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 PLBD2Q8NHP8 589 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 NARFQ9UHQ1 456 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 ZBTB1Q9Y2K1 713 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 ZNF330Q9Y3S2 320 aaPredicted RBP6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 PXDNLA1KZ92 1463 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 SCN7AQ01118 1682 aa6.07□□□□□ -1.44
RNU1-6P-201ENST00000516290 IBTKQ9P2D0 1353 aaPredicted RBP6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 BCORQ6W2J9 1755 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 RNF123Q5XPI4 1314 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 MAP3K15Q6ZN16 1313 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 MYH14Q7Z406 1995 aaKnown RBP6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 C4AP0C0L4 1744 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 MSH5O43196 834 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 CCT4P50991 539 aaKnown RBP6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 KRT24Q2M2I5 525 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 PARP10Q53GL7 1025 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 ZKSCAN2Q63HK3 967 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 KSR2Q6VAB6 950 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 COPS6Q7L5N1 327 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 RIC3Q7Z5B4 369 aa6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 FTSJ3Q8IY81 847 aaKnown RBP6.06□□□□□ -1.44
RNU1-6P-201ENST00000516290 SSH1Q8WYL5 1049 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms