RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 ZNF526Q8TF50 670 aaPredicted RBP13.72□□□□□ -0.21
LINC01843-201ENST00000515627 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
LINC01843-201ENST00000515627 COL15A1P39059 1388 aa13.71□□□□□ -0.21
LINC01843-201ENST00000515627 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
LINC01843-201ENST00000515627 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
LINC01843-201ENST00000515627 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
LINC01843-201ENST00000515627 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
LINC01843-201ENST00000515627 GPBP1L1Q9HC44 474 aaPredicted RBP13.71□□□□□ -0.21
LINC01843-201ENST00000515627 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.22
LINC01843-201ENST00000515627 ARFGEF1Q9Y6D6 1849 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 GNAT3A8MTJ3 354 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
LINC01843-201ENST00000515627 NARFQ9UHQ1 456 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
LINC01843-201ENST00000515627 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
LINC01843-201ENST00000515627 ZPR1O75312 459 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 FCHSD2O94868 740 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 CHRNA5P30532 468 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 NFIXQ14938 502 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
LINC01843-201ENST00000515627 CANXP27824 592 aaKnown RBP13.68□□□□□ -0.22
LINC01843-201ENST00000515627 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
LINC01843-201ENST00000515627 TTC5Q8N0Z6 440 aa13.68□□□□□ -0.22
LINC01843-201ENST00000515627 KIF3CO14782 793 aa13.67□□□□□ -0.22
LINC01843-201ENST00000515627 KCNQ3O43525 872 aa13.67□□□□□ -0.22
LINC01843-201ENST00000515627 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
LINC01843-201ENST00000515627 TEFQ10587 303 aa13.67□□□□□ -0.22
LINC01843-201ENST00000515627 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
LINC01843-201ENST00000515627 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
LINC01843-201ENST00000515627 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
LINC01843-201ENST00000515627 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
LINC01843-201ENST00000515627 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
LINC01843-201ENST00000515627 STARD3NLO95772 234 aa13.65□□□□□ -0.22
LINC01843-201ENST00000515627 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
LINC01843-201ENST00000515627 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
LINC01843-201ENST00000515627 SERPINB2P05120 415 aa13.64□□□□□ -0.23
LINC01843-201ENST00000515627 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
LINC01843-201ENST00000515627 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC01843-201ENST00000515627 A1BGP04217 495 aa13.63□□□□□ -0.23
LINC01843-201ENST00000515627 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
LINC01843-201ENST00000515627 MCM10Q7L590 875 aa13.63□□□□□ -0.23
LINC01843-201ENST00000515627 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
LINC01843-201ENST00000515627 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
LINC01843-201ENST00000515627 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
LINC01843-201ENST00000515627 ANKRD31Q8N7Z5 1873 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
LINC01843-201ENST00000515627 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
LINC01843-201ENST00000515627 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
LINC01843-201ENST00000515627 SBF1O95248 1867 aa13.61□□□□□ -0.23
LINC01843-201ENST00000515627 A0A087WZG4 1122 aa13.61□□□□□ -0.23
LINC01843-201ENST00000515627 NMRK2Q9NPI5 230 aa13.61□□□□□ -0.23
LINC01843-201ENST00000515627 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
LINC01843-201ENST00000515627 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
LINC01843-201ENST00000515627 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
LINC01843-201ENST00000515627 HSPA6P17066 643 aa13.6□□□□□ -0.23
LINC01843-201ENST00000515627 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
LINC01843-201ENST00000515627 PRELPP51888 382 aa13.6□□□□□ -0.23
LINC01843-201ENST00000515627 ZNF330Q9Y3S2 320 aaPredicted RBP13.6□□□□□ -0.23
LINC01843-201ENST00000515627 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
LINC01843-201ENST00000515627 CEP350Q5VT06 3117 aa13.59□□□□□ -0.23
LINC01843-201ENST00000515627 RASSF7Q02833 373 aa13.59□□□□□ -0.23
LINC01843-201ENST00000515627 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
LINC01843-201ENST00000515627 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
LINC01843-201ENST00000515627 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
LINC01843-201ENST00000515627 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
LINC01843-201ENST00000515627 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
LINC01843-201ENST00000515627 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
LINC01843-201ENST00000515627 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
LINC01843-201ENST00000515627 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
LINC01843-201ENST00000515627 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
LINC01843-201ENST00000515627 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
LINC01843-201ENST00000515627 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
LINC01843-201ENST00000515627 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
LINC01843-201ENST00000515627 H0YIN7 160 aa13.56□□□□□ -0.24
LINC01843-201ENST00000515627 TOMM70O94826 608 aa13.56□□□□□ -0.24
LINC01843-201ENST00000515627 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
LINC01843-201ENST00000515627 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
LINC01843-201ENST00000515627 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
LINC01843-201ENST00000515627 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
LINC01843-201ENST00000515627 NFKBIEO00221 500 aa13.55□□□□□ -0.24
LINC01843-201ENST00000515627 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
LINC01843-201ENST00000515627 LAMB4A4D0S4 1761 aa13.54□□□□□ -0.24
LINC01843-201ENST00000515627 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
LINC01843-201ENST00000515627 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
LINC01843-201ENST00000515627 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 LMNB1P20700 586 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 PDE6BP35913 854 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC01843-201ENST00000515627 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
LINC01843-201ENST00000515627 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
LINC01843-201ENST00000515627 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms