RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-234ENST00000515621 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
NR1I3-234ENST00000515621 GLI3P10071 1580 aa11.54□□□□□ -0.56
NR1I3-234ENST00000515621 RGS12O14924 1447 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 ATRNO75882 1429 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-234ENST00000515621 DDB1Q16531 1140 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-234ENST00000515621 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
NR1I3-234ENST00000515621 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-234ENST00000515621 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-234ENST00000515621 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
NR1I3-234ENST00000515621 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
NR1I3-234ENST00000515621 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
NR1I3-234ENST00000515621 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
NR1I3-234ENST00000515621 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
NR1I3-234ENST00000515621 USP21Q9UK80 565 aa11.52□□□□□ -0.57
NR1I3-234ENST00000515621 RLBP1P12271 317 aa11.51□□□□□ -0.57
NR1I3-234ENST00000515621 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
NR1I3-234ENST00000515621 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
NR1I3-234ENST00000515621 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-234ENST00000515621 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
NR1I3-234ENST00000515621 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
NR1I3-234ENST00000515621 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-234ENST00000515621 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
NR1I3-234ENST00000515621 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
NR1I3-234ENST00000515621 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
NR1I3-234ENST00000515621 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-234ENST00000515621 FLIIQ13045 1269 aa11.5□□□□□ -0.57
NR1I3-234ENST00000515621 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NR1I3-234ENST00000515621 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-234ENST00000515621 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-234ENST00000515621 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-234ENST00000515621 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-234ENST00000515621 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-234ENST00000515621 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
NR1I3-234ENST00000515621 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-234ENST00000515621 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NR1I3-234ENST00000515621 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-234ENST00000515621 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-234ENST00000515621 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
NR1I3-234ENST00000515621 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NR1I3-234ENST00000515621 AFF2P51816 1311 aa11.48□□□□□ -0.57
NR1I3-234ENST00000515621 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
NR1I3-234ENST00000515621 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
NR1I3-234ENST00000515621 C5P01031 1676 aa11.47□□□□□ -0.57
NR1I3-234ENST00000515621 RGL2O15211 777 aa11.47□□□□□ -0.57
NR1I3-234ENST00000515621 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-234ENST00000515621 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-234ENST00000515621 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-234ENST00000515621 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-234ENST00000515621 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-234ENST00000515621 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-234ENST00000515621 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-234ENST00000515621 PIGBQ92521 554 aa11.46□□□□□ -0.57
NR1I3-234ENST00000515621 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-234ENST00000515621 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-234ENST00000515621 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-234ENST00000515621 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NR1I3-234ENST00000515621 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-234ENST00000515621 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-234ENST00000515621 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-234ENST00000515621 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-234ENST00000515621 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-234ENST00000515621 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-234ENST00000515621 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
NR1I3-234ENST00000515621 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-234ENST00000515621 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-234ENST00000515621 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-234ENST00000515621 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
NR1I3-234ENST00000515621 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
NR1I3-234ENST00000515621 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NR1I3-234ENST00000515621 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-234ENST00000515621 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-234ENST00000515621 RREB1Q92766 1687 aa11.41□□□□□ -0.58
NR1I3-234ENST00000515621 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
NR1I3-234ENST00000515621 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-234ENST00000515621 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-234ENST00000515621 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
NR1I3-234ENST00000515621 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-234ENST00000515621 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-234ENST00000515621 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-234ENST00000515621 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-234ENST00000515621 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-234ENST00000515621 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-234ENST00000515621 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
NR1I3-234ENST00000515621 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
NR1I3-234ENST00000515621 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms