RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 UPF2Q9HAU5 1272 aaKnown RBP13.07□□□□□ -0.32
CDK18-222ENST00000515494 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
CDK18-222ENST00000515494 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
CDK18-222ENST00000515494 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
CDK18-222ENST00000515494 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
CDK18-222ENST00000515494 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
CDK18-222ENST00000515494 PDE4CQ08493 712 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
CDK18-222ENST00000515494 PNMA6EA0A0J9YXQ4 647 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 GNAI2P04899 355 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 TBC1D32Q96NH3 1257 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
CDK18-222ENST00000515494 ARXQ96QS3 562 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.324e-8■■□□□ 12.3
CDK18-222ENST00000515494 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
CDK18-222ENST00000515494 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
CDK18-222ENST00000515494 ABCA3Q99758 1704 aa13.04□□□□□ -0.32
CDK18-222ENST00000515494 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
CDK18-222ENST00000515494 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
CDK18-222ENST00000515494 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
CDK18-222ENST00000515494 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
CDK18-222ENST00000515494 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 PHLPP1O60346 1717 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
CDK18-222ENST00000515494 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
CDK18-222ENST00000515494 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
CDK18-222ENST00000515494 NBPF7P0C2Y1 421 aaPredicted RBP13.02□□□□□ -0.32
CDK18-222ENST00000515494 GNAI3P08754 354 aa13.02□□□□□ -0.33
CDK18-222ENST00000515494 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
CDK18-222ENST00000515494 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
CDK18-222ENST00000515494 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
CDK18-222ENST00000515494 HMMRO75330 724 aa13.02□□□□□ -0.33
CDK18-222ENST00000515494 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.33
CDK18-222ENST00000515494 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
CDK18-222ENST00000515494 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
CDK18-222ENST00000515494 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
CDK18-222ENST00000515494 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
CDK18-222ENST00000515494 HOXB7P09629 217 aa13.01□□□□□ -0.33
CDK18-222ENST00000515494 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
CDK18-222ENST00000515494 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
CDK18-222ENST00000515494 CERKQ8TCT0 537 aa13□□□□□ -0.33
CDK18-222ENST00000515494 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
CDK18-222ENST00000515494 EXOC5O00471 708 aa13□□□□□ -0.33
CDK18-222ENST00000515494 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
CDK18-222ENST00000515494 ADCY9O60503 1353 aa13□□□□□ -0.33
CDK18-222ENST00000515494 CWF19L2Q2TBE0 894 aaKnown RBP13□□□□□ -0.33
CDK18-222ENST00000515494 BEND3Q5T5X7 828 aa13□□□□□ -0.33
CDK18-222ENST00000515494 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
CDK18-222ENST00000515494 FGD1P98174 961 aa12.99□□□□□ -0.33
CDK18-222ENST00000515494 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
CDK18-222ENST00000515494 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
CDK18-222ENST00000515494 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
CDK18-222ENST00000515494 ATP8B2P98198 1209 aa12.99□□□□□ -0.33
CDK18-222ENST00000515494 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
CDK18-222ENST00000515494 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
CDK18-222ENST00000515494 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
CDK18-222ENST00000515494 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
CDK18-222ENST00000515494 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
CDK18-222ENST00000515494 A1BGP04217 495 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
CDK18-222ENST00000515494 HSPA1LP34931 641 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
CDK18-222ENST00000515494 PDIA6Q15084 440 aa12.97□□□□□ -0.33
CDK18-222ENST00000515494 PIGBQ92521 554 aa12.97□□□□□ -0.33
CDK18-222ENST00000515494 SDSP20132 328 aa12.97□□□□□ -0.33
CDK18-222ENST00000515494 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
CDK18-222ENST00000515494 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
CDK18-222ENST00000515494 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
CDK18-222ENST00000515494 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.33
CDK18-222ENST00000515494 DDB1Q16531 1140 aa12.96□□□□□ -0.34
CDK18-222ENST00000515494 KSR2Q6VAB6 950 aa12.96□□□□□ -0.34
CDK18-222ENST00000515494 LRRCC1Q9C099 1032 aa12.96□□□□□ -0.34
CDK18-222ENST00000515494 ABCC6O95255 1503 aa12.96□□□□□ -0.34
CDK18-222ENST00000515494 CDC45O75419 566 aa12.95□□□□□ -0.34
CDK18-222ENST00000515494 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
CDK18-222ENST00000515494 BECN1Q14457 450 aa12.95□□□□□ -0.34
CDK18-222ENST00000515494 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
CDK18-222ENST00000515494 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDK18-222ENST00000515494 C9orf78Q9NZ63 289 aaPredicted RBP12.95□□□□□ -0.34
CDK18-222ENST00000515494 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
CDK18-222ENST00000515494 PDE1AP54750 535 aa12.95□□□□□ -0.34
CDK18-222ENST00000515494 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
CDK18-222ENST00000515494 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms