RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 GCP02774 474 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
PCDH1-208ENST00000515351 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
PCDH1-208ENST00000515351 MCCP23508 829 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 NEK4P51957 841 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 GAS2L3Q86XJ1 694 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 ANAPC15P60006 121 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 SRGAP3O43295 1099 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 ADCY9O60503 1353 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
PCDH1-208ENST00000515351 MCM2P49736 904 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 RHPN1Q8TCX5 695 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 IL17RAQ96F46 866 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
PCDH1-208ENST00000515351 CRYBG1Q9Y4K1 1723 aa18.28■□□□□ 0.52
PCDH1-208ENST00000515351 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
PCDH1-208ENST00000515351 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
PCDH1-208ENST00000515351 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
PCDH1-208ENST00000515351 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
PCDH1-208ENST00000515351 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
PCDH1-208ENST00000515351 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
PCDH1-208ENST00000515351 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
PCDH1-208ENST00000515351 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
PCDH1-208ENST00000515351 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
PCDH1-208ENST00000515351 ANXA1P04083 346 aa18.27■□□□□ 0.51
PCDH1-208ENST00000515351 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.51
PCDH1-208ENST00000515351 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.51
PCDH1-208ENST00000515351 ZDHHC9Q9Y397 364 aa18.27■□□□□ 0.51
PCDH1-208ENST00000515351 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
PCDH1-208ENST00000515351 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
PCDH1-208ENST00000515351 KIF1AQ12756 1690 aa18.26■□□□□ 0.51
PCDH1-208ENST00000515351 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
PCDH1-208ENST00000515351 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
PCDH1-208ENST00000515351 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
PCDH1-208ENST00000515351 LMTK3Q96Q04 1460 aa18.24■□□□□ 0.51
PCDH1-208ENST00000515351 GIGYF1O75420 1035 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-208ENST00000515351 CUL4AQ13619 759 aa18.24■□□□□ 0.51
PCDH1-208ENST00000515351 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
PCDH1-208ENST00000515351 IL25Q9H293 177 aa18.24■□□□□ 0.51
PCDH1-208ENST00000515351 MTX1Q13505 466 aa18.23■□□□□ 0.51
PCDH1-208ENST00000515351 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
PCDH1-208ENST00000515351 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 HSPA4P34932 840 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 AXIN2Q9Y2T1 843 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
PCDH1-208ENST00000515351 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
PCDH1-208ENST00000515351 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
PCDH1-208ENST00000515351 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
PCDH1-208ENST00000515351 KSR2Q6VAB6 950 aa18.21■□□□□ 0.51
PCDH1-208ENST00000515351 CNTROBQ8N137 903 aa18.21■□□□□ 0.5
PCDH1-208ENST00000515351 SGSM2O43147 1006 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 TTC41PQ6P2S7 1318 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 RAD50Q92878 1312 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 MST1RQ04912 1400 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 ZNF445P59923 1031 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
PCDH1-208ENST00000515351 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
PCDH1-208ENST00000515351 C5P01031 1676 aa18.19■□□□□ 0.5
PCDH1-208ENST00000515351 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
PCDH1-208ENST00000515351 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
PCDH1-208ENST00000515351 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-208ENST00000515351 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
PCDH1-208ENST00000515351 HYPKQ9NX55 129 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 C1orf167Q5SNV9 1468 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 BRD1O95696 1058 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 ERBB3P21860 1342 aa18.18■□□□□ 0.5
PCDH1-208ENST00000515351 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
PCDH1-208ENST00000515351 NCLP19338 710 aaKnown RBP18.17■□□□□ 0.5
PCDH1-208ENST00000515351 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
PCDH1-208ENST00000515351 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
PCDH1-208ENST00000515351 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
PCDH1-208ENST00000515351 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
PCDH1-208ENST00000515351 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
PCDH1-208ENST00000515351 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
PCDH1-208ENST00000515351 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
PCDH1-208ENST00000515351 LINS1Q8NG48 757 aa18.16■□□□□ 0.5
PCDH1-208ENST00000515351 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
PCDH1-208ENST00000515351 TCHHQ07283 1943 aa18.16■□□□□ 0.5
PCDH1-208ENST00000515351 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-208ENST00000515351 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
PCDH1-208ENST00000515351 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDH1-208ENST00000515351 CHAMP1Q96JM3 812 aa18.15■□□□□ 0.5
PCDH1-208ENST00000515351 UTYO14607 1347 aa18.15■□□□□ 0.5
PCDH1-208ENST00000515351 CLCN1P35523 988 aa18.14■□□□□ 0.5
PCDH1-208ENST00000515351 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.5
PCDH1-208ENST00000515351 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.5
PCDH1-208ENST00000515351 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms