RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 IVNS1ABPQ9Y6Y0 642 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 J3QL48 77 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 RPLP1P05386 114 aaKnown RBP3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 UBAP2LQ14157 1087 aaKnown RBP3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 C11orf91Q3C1V1 193 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 ALKBH2Q6NS38 261 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 TPCN2Q8NHX9 752 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 KIFC2Q96AC6 838 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 WASF2Q9Y6W5 498 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 SLC9A9Q8IVB4 645 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 RGL4Q8IZJ4 473 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 ABTB2Q8N961 1025 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 NDFIP2Q9NV92 336 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 ALDH1A1P00352 501 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 NANOS1Q8WY41 292 aaKnown RBP3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 HPS1Q92902 700 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 FZD6O60353 706 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 COX20Q5RI15 118 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 NBPF10Q6P3W6 841 aaKnown RBP3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 TSEN2Q8NCE0 465 aaKnown RBP3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 ITPKCQ96DU7 683 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 C16orf46Q6P387 395 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 NPAS4Q8IUM7 802 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 CNKSR1Q969H4 720 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 DMRTB1Q96MA1 342 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 DCTN4Q9UJW0 460 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 DYRK1BQ9Y463 629 aa3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 RBM19Q9Y4C8 960 aaKnown RBP3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 DNMT3AQ9Y6K1 912 aaPredicted RBP3.06□□□□□ -1.92
AC025539.1-201ENST00000515343 SERTM1A2A2V5 107 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 FAM182BQ5T319 152 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 LINC00528Q8N1L1 170 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 CYLDQ9NQC7 956 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 ANKIB1Q9P2G1 1089 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 TRIM46Q7Z4K8 759 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 MDFIQ99750 246 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 MRPL14Q6P1L8 145 aaKnown RBP3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 ILDR2Q71H61 639 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 TNS4Q8IZW8 715 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 DNAJC25Q9H1X3 360 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 TSPAN10Q9H1Z9 355 aaPredicted RBP3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 STIM2Q9P246 746 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 ABCC9O60706 1549 aa3.05□□□□□ -1.92
AC025539.1-201ENST00000515343 EFSO43281 561 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 PURBQ96QR8 312 aaKnown RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 NIFKQ9BYG3 293 aaKnown RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 FAM13BQ9NYF5 915 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 RB1CC1Q8TDY2 1594 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 SLC35F4A4IF30 521 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 TREHO43280 583 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 WDR4P57081 412 aaKnown RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 GTF3C2Q8WUA4 911 aaPredicted RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 GZF1Q9H116 711 aaPredicted RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 A0A1B0GTH6 734 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 VSIG8P0DPA2 414 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 ATP4AP20648 1035 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 BRD2P25440 801 aaKnown RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 USP5P45974 858 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 MFAP1P55081 439 aaKnown RBP3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 TMCO4Q5TGY1 634 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 Q6ZNB5 142 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 ZIC5Q96T25 663 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 AAASQ9NRG9 546 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 BCS1LQ9Y276 419 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 USP3Q9Y6I4 520 aa3.04□□□□□ -1.92
AC025539.1-201ENST00000515343 GIPC1O14908 333 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 MZF1P28698 734 aaPredicted RBP3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 SCG3Q8WXD2 468 aaKnown RBP3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 NLRP3Q96P20 1036 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 ZSCAN10Q96SZ4 725 aaPredicted RBP3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 LRFN2Q9ULH4 789 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 TGFBR3LH3BV60 316 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 NEFLP07196 543 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 FAM157BP0CG42 384 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 VEGFBP49765 207 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 EHHADHQ08426 723 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 TLR1Q15399 786 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 C4orf17Q53FE4 359 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 CDCA8Q53HL2 280 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 CFHR5Q9BXR6 569 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 ZFAND3Q9H8U3 227 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 SENP2Q9HC62 589 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 AVENQ9NQS1 362 aaPredicted RBP3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 LRRC4BQ9NT99 713 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 PDZRN3Q9UPQ7 1066 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 TTC24A2A3L6 582 aaPredicted RBP3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 FBF1Q8TES7 1133 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 CHMP3Q9Y3E7 222 aa3.03□□□□□ -1.92
AC025539.1-201ENST00000515343 PRMT3O60678 531 aa3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 INPP5BP32019 993 aa3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 CBLBQ13191 982 aa3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 CCDC27Q2M243 656 aa3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 ALDH16A1Q8IZ83 802 aa3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 ZNF594Q96JF6 807 aaPredicted RBP3.03□□□□□ -1.93
AC025539.1-201ENST00000515343 MAP3K6O95382 1288 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 THBS1P07996 1170 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 ITGAEP38570 1179 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 GNASQ5JWF2 1037 aa3.02□□□□□ -1.93
AC025539.1-201ENST00000515343 TRIM47Q96LD4 638 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms