RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	DNAJC10	Q8IXB1	793 aa		33.43	■■■□□ 2.94
SGMS2-209	ENST00000515332	SOS1	Q07889	1333 aa	Predicted RBP	33.4	■■■□□ 2.94
SGMS2-209	ENST00000515332	AFDN	P55196	1824 aa	Known RBP	33.39	■■■□□ 2.94
SGMS2-209	ENST00000515332	NFIX	Q14938	502 aa		33.39	■■■□□ 2.94
SGMS2-209	ENST00000515332	SULT6B1	Q6IMI4	303 aa		33.37	■■■□□ 2.93
SGMS2-209	ENST00000515332	SCN11A	Q9UI33	1791 aa		33.36	■■■□□ 2.93
SGMS2-209	ENST00000515332	TIAM2	Q8IVF5	1701 aa		33.36	■■■□□ 2.93
SGMS2-209	ENST00000515332	TTLL6	Q8N841	843 aa		33.35	■■■□□ 2.93
SGMS2-209	ENST00000515332	NARF	Q9UHQ1	456 aa		33.35	■■■□□ 2.93
SGMS2-209	ENST00000515332	DLEC1	Q9Y238	1755 aa		33.34	■■■□□ 2.93
SGMS2-209	ENST00000515332	NRXN2	Q9P2S2	1712 aa		33.34	■■■□□ 2.93
SGMS2-209	ENST00000515332	CYP19A1	P11511	503 aa	Predicted RBP	33.34	■■■□□ 2.93
SGMS2-209	ENST00000515332	SERPINB2	P05120	415 aa		33.33	■■■□□ 2.93
SGMS2-209	ENST00000515332	C2CD5	Q86YS7	1000 aa		33.33	■■■□□ 2.93
SGMS2-209	ENST00000515332	COL15A1	P39059	1388 aa		33.33	■■■□□ 2.93
SGMS2-209	ENST00000515332	NFKBIE	O00221	500 aa		33.32	■■■□□ 2.92
SGMS2-209	ENST00000515332	BCL2L12	Q9HB09	334 aa		33.32	■■■□□ 2.92
SGMS2-209	ENST00000515332	CCDC88A	Q3V6T2	1871 aa		33.31	■■■□□ 2.92
SGMS2-209	ENST00000515332	SLC52A2	Q9HAB3	445 aa		33.31	■■■□□ 2.92
SGMS2-209	ENST00000515332	POTEC	B2RU33	542 aa		33.3	■■■□□ 2.92
SGMS2-209	ENST00000515332	SLC39A6	Q13433	755 aa		33.3	■■■□□ 2.92
SGMS2-209	ENST00000515332	PCGF6	Q9BYE7	350 aa		33.3	■■■□□ 2.92
SGMS2-209	ENST00000515332	LGR6	Q9HBX8	967 aa		33.3	■■■□□ 2.92
SGMS2-209	ENST00000515332	ZBTB1	Q9Y2K1	713 aa		33.3	■■■□□ 2.92
SGMS2-209	ENST00000515332	AKAP4	Q5JQC9	854 aa		33.29	■■■□□ 2.92
SGMS2-209	ENST00000515332	PANK3	Q9H999	370 aa		33.29	■■■□□ 2.92
SGMS2-209	ENST00000515332	CARMIL3	Q8ND23	1372 aa		33.29	■■■□□ 2.92
SGMS2-209	ENST00000515332		H0YIN7	160 aa		33.28	■■■□□ 2.92
SGMS2-209	ENST00000515332	MORC1	Q86VD1	984 aa		33.27	■■■□□ 2.92
SGMS2-209	ENST00000515332	IL13	P35225	146 aa		33.25	■■■□□ 2.91
SGMS2-209	ENST00000515332	DPY19L2	Q6NUT2	758 aa		33.24	■■■□□ 2.91
SGMS2-209	ENST00000515332	BICDL1	Q6ZP65	573 aa		33.24	■■■□□ 2.91
SGMS2-209	ENST00000515332	RNMT	O43148	476 aa	Known RBP	33.22	■■■□□ 2.91
SGMS2-209	ENST00000515332	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.22	■■■□□ 2.91
SGMS2-209	ENST00000515332	MRC1	P22897	1456 aa		33.22	■■■□□ 2.91
SGMS2-209	ENST00000515332	CANX	P27824	592 aa	Known RBP	33.21	■■■□□ 2.91
SGMS2-209	ENST00000515332	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
SGMS2-209	ENST00000515332	MKRN1	Q9UHC7	482 aa	Known RBP	33.2	■■■□□ 2.91
SGMS2-209	ENST00000515332	C21orf2	O43822	256 aa		33.19	■■■□□ 2.9
SGMS2-209	ENST00000515332	ERFE	Q4G0M1	354 aa		33.19	■■■□□ 2.9
SGMS2-209	ENST00000515332	CREBZF	Q9NS37	354 aa		33.17	■■■□□ 2.9
SGMS2-209	ENST00000515332	CHADL	Q6NUI6	762 aa		33.16	■■■□□ 2.9
SGMS2-209	ENST00000515332	VSIG10	Q8N0Z9	540 aa		33.16	■■■□□ 2.9
SGMS2-209	ENST00000515332	ANKRD31	Q8N7Z5	1873 aa		33.16	■■■□□ 2.9
SGMS2-209	ENST00000515332	POTEI	P0CG38	1075 aa		33.15	■■■□□ 2.9
SGMS2-209	ENST00000515332	POTEJ	P0CG39	1038 aa		33.15	■■■□□ 2.9
SGMS2-209	ENST00000515332	VIRMA	Q69YN4	1812 aa	Known RBP	33.15	■■■□□ 2.9
SGMS2-209	ENST00000515332	CCDC24	Q8N4L8	307 aa		33.15	■■■□□ 2.9
SGMS2-209	ENST00000515332	TBC1D9B	Q66K14	1250 aa		33.14	■■■□□ 2.9
SGMS2-209	ENST00000515332	DICER1	Q9UPY3	1922 aa	Known RBP	33.14	■■■□□ 2.9
SGMS2-209	ENST00000515332	FER1L6	Q2WGJ9	1857 aa		33.12	■■■□□ 2.89
SGMS2-209	ENST00000515332	HMOX1	P09601	288 aa		33.12	■■■□□ 2.89
SGMS2-209	ENST00000515332	PDE6B	P35913	854 aa		33.12	■■■□□ 2.89
SGMS2-209	ENST00000515332	EIF5	P55010	431 aa	Known RBP	33.12	■■■□□ 2.89
SGMS2-209	ENST00000515332	BRIP1	Q9BX63	1249 aa		33.12	■■■□□ 2.89
SGMS2-209	ENST00000515332	COL11A2	P13942	1736 aa	Predicted RBP	33.11	■■■□□ 2.89
SGMS2-209	ENST00000515332	DDN	O94850	711 aa	Predicted RBP	33.11	■■■□□ 2.89
SGMS2-209	ENST00000515332		A0A087WZG4	1122 aa		33.1	■■■□□ 2.89
SGMS2-209	ENST00000515332	PRR5L	Q6MZQ0	368 aa		33.1	■■■□□ 2.89
SGMS2-209	ENST00000515332	TIMELESS	Q9UNS1	1208 aa		33.1	■■■□□ 2.89
SGMS2-209	ENST00000515332	PDZRN3	Q9UPQ7	1066 aa		33.1	■■■□□ 2.89
SGMS2-209	ENST00000515332	FOXN1	O15353	648 aa		33.09	■■■□□ 2.89
SGMS2-209	ENST00000515332	STARD3NL	O95772	234 aa		33.09	■■■□□ 2.89
SGMS2-209	ENST00000515332	MTHFSD	Q2M296	383 aa	Known RBP	33.09	■■■□□ 2.89
SGMS2-209	ENST00000515332	TAOK3	Q9H2K8	898 aa		33.09	■■■□□ 2.89
SGMS2-209	ENST00000515332	UBR2	Q8IWV8	1755 aa		33.09	■■■□□ 2.89
SGMS2-209	ENST00000515332	LTBP3	Q9NS15	1303 aa		33.07	■■■□□ 2.88
SGMS2-209	ENST00000515332	HSPA5	P11021	654 aa	Known RBP	33.07	■■■□□ 2.88
SGMS2-209	ENST00000515332	TBC1D2B	Q9UPU7	963 aa		33.06	■■■□□ 2.88
SGMS2-209	ENST00000515332	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.06	■■■□□ 2.88
SGMS2-209	ENST00000515332	CNTNAP1	P78357	1384 aa		33.06	■■■□□ 2.88
SGMS2-209	ENST00000515332	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
SGMS2-209	ENST00000515332	TTC5	Q8N0Z6	440 aa		33.05	■■■□□ 2.88
SGMS2-209	ENST00000515332	KNSTRN	Q9Y448	316 aa		33.05	■■■□□ 2.88
SGMS2-209	ENST00000515332	SCN7A	Q01118	1682 aa		33.04	■■■□□ 2.88
SGMS2-209	ENST00000515332	SLX4	Q8IY92	1834 aa		33.02	■■■□□ 2.88
SGMS2-209	ENST00000515332	CNKSR1	Q969H4	720 aa		33.01	■■■□□ 2.87
SGMS2-209	ENST00000515332	ZNF496	Q96IT1	587 aa	Predicted RBP	33.01	■■■□□ 2.87
SGMS2-209	ENST00000515332	PRDM10	Q9NQV6	1147 aa		33.01	■■■□□ 2.87
SGMS2-209	ENST00000515332	PASK	Q96RG2	1323 aa		33.01	■■■□□ 2.87
SGMS2-209	ENST00000515332	PRPF40B	Q6NWY9	871 aa	Known RBP	33	■■■□□ 2.87
SGMS2-209	ENST00000515332	CACNA1S	Q13698	1873 aa		32.99	■■■□□ 2.87
SGMS2-209	ENST00000515332	NPHP1	O15259	732 aa		32.99	■■■□□ 2.87
SGMS2-209	ENST00000515332	STYK1	Q6J9G0	422 aa		32.99	■■■□□ 2.87
SGMS2-209	ENST00000515332	LDHD	Q86WU2	507 aa		32.99	■■■□□ 2.87
SGMS2-209	ENST00000515332	CNBD1	Q8NA66	436 aa		32.99	■■■□□ 2.87
SGMS2-209	ENST00000515332	HEG1	Q9ULI3	1381 aa		32.98	■■■□□ 2.87
SGMS2-209	ENST00000515332	SETDB2	Q96T68	719 aa		32.98	■■■□□ 2.87
SGMS2-209	ENST00000515332	IQCA1L	A6NCM1	817 aa		32.97	■■■□□ 2.87
SGMS2-209	ENST00000515332	SRGN	P10124	158 aa		32.97	■■■□□ 2.87
SGMS2-209	ENST00000515332	AIDA	Q96BJ3	306 aa		32.97	■■■□□ 2.87
SGMS2-209	ENST00000515332	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.97	■■■□□ 2.87
SGMS2-209	ENST00000515332	IL6ST	P40189	918 aa	Predicted RBP	32.96	■■■□□ 2.87
SGMS2-209	ENST00000515332	CTCF	P49711	727 aa	Predicted RBP	32.96	■■■□□ 2.87
SGMS2-209	ENST00000515332	VEGFB	P49765	207 aa		32.96	■■■□□ 2.87
SGMS2-209	ENST00000515332	ST5	P78524	1137 aa		32.95	■■■□□ 2.87
SGMS2-209	ENST00000515332	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.95	■■■□□ 2.87
SGMS2-209	ENST00000515332	SOGA3	Q5TF21	947 aa		32.95	■■■□□ 2.87
SGMS2-209	ENST00000515332	ZNF790	Q6PG37	636 aa		32.95	■■■□□ 2.87
SGMS2-209	ENST00000515332	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.95	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms