RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
DDR1-278ENST00000515233 CHRNA5P30532 468 aa20.32■□□□□ 0.84
DDR1-278ENST00000515233 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
DDR1-278ENST00000515233 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
DDR1-278ENST00000515233 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
DDR1-278ENST00000515233 COL15A1P39059 1388 aa20.32■□□□□ 0.84
DDR1-278ENST00000515233 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
DDR1-278ENST00000515233 APLP1P51693 650 aa20.31■□□□□ 0.84
DDR1-278ENST00000515233 NFIXQ14938 502 aa20.31■□□□□ 0.84
DDR1-278ENST00000515233 BCL2L12Q9HB09 334 aa20.3■□□□□ 0.84
DDR1-278ENST00000515233 UBR2Q8IWV8 1755 aa20.3■□□□□ 0.84
DDR1-278ENST00000515233 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
DDR1-278ENST00000515233 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
DDR1-278ENST00000515233 SBF1O95248 1867 aa20.28■□□□□ 0.84
DDR1-278ENST00000515233 SERPINB2P05120 415 aa20.28■□□□□ 0.84
DDR1-278ENST00000515233 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
DDR1-278ENST00000515233 COL3A1P02461 1466 aaPredicted RBP20.27■□□□□ 0.84
DDR1-278ENST00000515233 STARD3NLO95772 234 aa20.27■□□□□ 0.84
DDR1-278ENST00000515233 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
DDR1-278ENST00000515233 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
DDR1-278ENST00000515233 IL17REQ8NFR9 667 aa20.27■□□□□ 0.84
DDR1-278ENST00000515233 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
DDR1-278ENST00000515233 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
DDR1-278ENST00000515233 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
DDR1-278ENST00000515233 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
DDR1-278ENST00000515233 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
DDR1-278ENST00000515233 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
DDR1-278ENST00000515233 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
DDR1-278ENST00000515233 TEFQ10587 303 aa20.25■□□□□ 0.83
DDR1-278ENST00000515233 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
DDR1-278ENST00000515233 A0A087WZG4 1122 aa20.24■□□□□ 0.83
DDR1-278ENST00000515233 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
DDR1-278ENST00000515233 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
DDR1-278ENST00000515233 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
DDR1-278ENST00000515233 ZC3H4Q9UPT8 1303 aaKnown RBP20.24■□□□□ 0.83
DDR1-278ENST00000515233 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
DDR1-278ENST00000515233 FSTL1Q12841 308 aa20.23■□□□□ 0.83
DDR1-278ENST00000515233 DLEC1Q9Y238 1755 aa20.23■□□□□ 0.83
DDR1-278ENST00000515233 TTLL6Q8N841 843 aa20.22■□□□□ 0.83
DDR1-278ENST00000515233 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
DDR1-278ENST00000515233 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
DDR1-278ENST00000515233 H0YIN7 160 aa20.21■□□□□ 0.83
DDR1-278ENST00000515233 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
DDR1-278ENST00000515233 LMNB1P20700 586 aa20.2■□□□□ 0.82
DDR1-278ENST00000515233 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
DDR1-278ENST00000515233 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
DDR1-278ENST00000515233 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
DDR1-278ENST00000515233 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
DDR1-278ENST00000515233 RASSF7Q02833 373 aa20.19■□□□□ 0.82
DDR1-278ENST00000515233 TBC1D9BQ66K14 1250 aa20.19■□□□□ 0.82
DDR1-278ENST00000515233 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
DDR1-278ENST00000515233 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
DDR1-278ENST00000515233 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
DDR1-278ENST00000515233 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
DDR1-278ENST00000515233 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
DDR1-278ENST00000515233 WDR90Q96KV7 1748 aa20.17■□□□□ 0.82
DDR1-278ENST00000515233 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
DDR1-278ENST00000515233 PDE6BP35913 854 aa20.17■□□□□ 0.82
DDR1-278ENST00000515233 PRELPP51888 382 aa20.17■□□□□ 0.82
DDR1-278ENST00000515233 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
DDR1-278ENST00000515233 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
DDR1-278ENST00000515233 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
DDR1-278ENST00000515233 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
DDR1-278ENST00000515233 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 A1BGP04217 495 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 PRKAR2BP31323 418 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 SCN7AQ01118 1682 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 CCDC88AQ3V6T2 1871 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 ANKRD31Q8N7Z5 1873 aa20.15■□□□□ 0.82
DDR1-278ENST00000515233 NFKBIEO00221 500 aa20.14■□□□□ 0.81
DDR1-278ENST00000515233 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
DDR1-278ENST00000515233 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
DDR1-278ENST00000515233 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
DDR1-278ENST00000515233 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
DDR1-278ENST00000515233 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
DDR1-278ENST00000515233 KCNQ3O43525 872 aa20.13■□□□□ 0.81
DDR1-278ENST00000515233 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
DDR1-278ENST00000515233 SETDB2Q96T68 719 aa20.13■□□□□ 0.81
DDR1-278ENST00000515233 USP16Q9Y5T5 823 aa20.13■□□□□ 0.81
DDR1-278ENST00000515233 JMYQ8N9B5 988 aa20.12■□□□□ 0.81
DDR1-278ENST00000515233 ZNF622Q969S3 477 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDR1-278ENST00000515233 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
DDR1-278ENST00000515233 HTRA3P83110 453 aa20.11■□□□□ 0.81
DDR1-278ENST00000515233 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
DDR1-278ENST00000515233 CLEC4GQ6UXB4 293 aa20.1■□□□□ 0.81
DDR1-278ENST00000515233 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
DDR1-278ENST00000515233 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 C21orf2O43822 256 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 PPP2R1AP30153 589 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 CCDC24Q8N4L8 307 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 CNBD1Q8NA66 436 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
DDR1-278ENST00000515233 CNKSR1Q969H4 720 aa20.09■□□□□ 0.81
DDR1-278ENST00000515233 LTBP3Q9NS15 1303 aa20.08■□□□□ 0.81
DDR1-278ENST00000515233 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
DDR1-278ENST00000515233 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.81
DDR1-278ENST00000515233 POTECB2RU33 542 aa20.08■□□□□ 0.81
DDR1-278ENST00000515233 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
DDR1-278ENST00000515233 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms