RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
SDHA-217ENST00000514233 FSTL1Q12841 308 aa12.21□□□□□ -0.45
SDHA-217ENST00000514233 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
SDHA-217ENST00000514233 USPL1Q5W0Q7 1092 aa12.21□□□□□ -0.45
SDHA-217ENST00000514233 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
SDHA-217ENST00000514233 CHRNA5P30532 468 aa12.2□□□□□ -0.46
SDHA-217ENST00000514233 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
SDHA-217ENST00000514233 COL15A1P39059 1388 aa12.19□□□□□ -0.46
SDHA-217ENST00000514233 NFIXQ14938 502 aa12.19□□□□□ -0.46
SDHA-217ENST00000514233 RNF181Q9P0P0 153 aa12.19□□□□□ -0.46
SDHA-217ENST00000514233 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
SDHA-217ENST00000514233 HMOX1P09601 288 aa12.18□□□□□ -0.46
SDHA-217ENST00000514233 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
SDHA-217ENST00000514233 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
SDHA-217ENST00000514233 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
SDHA-217ENST00000514233 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
SDHA-217ENST00000514233 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
SDHA-217ENST00000514233 SBF1O95248 1867 aa12.18□□□□□ -0.46
SDHA-217ENST00000514233 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
SDHA-217ENST00000514233 TNRC6CQ9HCJ0 1690 aaKnown RBP12.17□□□□□ -0.46
SDHA-217ENST00000514233 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
SDHA-217ENST00000514233 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
SDHA-217ENST00000514233 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
SDHA-217ENST00000514233 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
SDHA-217ENST00000514233 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
SDHA-217ENST00000514233 DLEC1Q9Y238 1755 aa12.16□□□□□ -0.46
SDHA-217ENST00000514233 STARD3NLO95772 234 aa12.16□□□□□ -0.46
SDHA-217ENST00000514233 SERPINB2P05120 415 aa12.16□□□□□ -0.46
SDHA-217ENST00000514233 LMNB1P20700 586 aa12.16□□□□□ -0.46
SDHA-217ENST00000514233 EIF5P55010 431 aaKnown RBP12.16□□□□□ -0.46
SDHA-217ENST00000514233 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
SDHA-217ENST00000514233 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
SDHA-217ENST00000514233 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
SDHA-217ENST00000514233 A0A087WZG4 1122 aa12.15□□□□□ -0.46
SDHA-217ENST00000514233 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
SDHA-217ENST00000514233 KLRG1Q96E93 195 aa12.15□□□□□ -0.46
SDHA-217ENST00000514233 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
SDHA-217ENST00000514233 RRAGCQ9HB90 399 aa12.15□□□□□ -0.46
SDHA-217ENST00000514233 PDZRN3Q9UPQ7 1066 aa12.15□□□□□ -0.46
SDHA-217ENST00000514233 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
SDHA-217ENST00000514233 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
SDHA-217ENST00000514233 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 H0YIN7 160 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 RASSF7Q02833 373 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
SDHA-217ENST00000514233 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
SDHA-217ENST00000514233 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
SDHA-217ENST00000514233 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
SDHA-217ENST00000514233 PRELPP51888 382 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 IL17REQ8NFR9 667 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
SDHA-217ENST00000514233 BRIP1Q9BX63 1249 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
SDHA-217ENST00000514233 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
SDHA-217ENST00000514233 NFKBIEO00221 500 aa12.11□□□□□ -0.47
SDHA-217ENST00000514233 PDE6BP35913 854 aa12.11□□□□□ -0.47
SDHA-217ENST00000514233 TEFQ10587 303 aa12.11□□□□□ -0.47
SDHA-217ENST00000514233 HTRA3P83110 453 aa12.1□□□□□ -0.47
SDHA-217ENST00000514233 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
SDHA-217ENST00000514233 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
SDHA-217ENST00000514233 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
SDHA-217ENST00000514233 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
SDHA-217ENST00000514233 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
SDHA-217ENST00000514233 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.47
SDHA-217ENST00000514233 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
SDHA-217ENST00000514233 U2SURPO15042 1029 aaKnown RBP12.08□□□□□ -0.48
SDHA-217ENST00000514233 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
SDHA-217ENST00000514233 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 RGL2O15211 777 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 CACNA1SQ13698 1873 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
SDHA-217ENST00000514233 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
SDHA-217ENST00000514233 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
SDHA-217ENST00000514233 DICER1Q9UPY3 1922 aaKnown RBP12.06□□□□□ -0.48
SDHA-217ENST00000514233 POTECB2RU33 542 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 C21orf2O43822 256 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 A1BGP04217 495 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 SRGNP10124 158 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 STYK1Q6J9G0 422 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 CLEC4GQ6UXB4 293 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 CNKSR1Q969H4 720 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.48
SDHA-217ENST00000514233 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
SDHA-217ENST00000514233 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
SDHA-217ENST00000514233 ST5P78524 1137 aa12.05□□□□□ -0.48
SDHA-217ENST00000514233 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
SDHA-217ENST00000514233 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms