RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 ZNF518AQ6AHZ1 1483 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 A0A087WZG4 1122 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 GPS2Q13227 327 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 CFAP100Q494V2 611 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 CCDC183Q5T5S1 534 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
PRDM16-208ENST00000514189 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 CHPF2Q9P2E5 772 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
PRDM16-208ENST00000514189 DHX37Q8IY37 1157 aaKnown RBP15.38■□□□□ 0.05
PRDM16-208ENST00000514189 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
PRDM16-208ENST00000514189 GOLIM4O00461 696 aa15.37■□□□□ 0.05
PRDM16-208ENST00000514189 EIF4A2Q14240 407 aaKnown RBP15.37■□□□□ 0.05
PRDM16-208ENST00000514189 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
PRDM16-208ENST00000514189 CEP57L1Q8IYX8 460 aa15.37■□□□□ 0.05
PRDM16-208ENST00000514189 GPTP24298 496 aa15.37■□□□□ 0.05
PRDM16-208ENST00000514189 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
PRDM16-208ENST00000514189 UHRF1BP1LA0JNW5 1464 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 ZBTB7BO15156 539 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 CLCN1P35523 988 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 CHRNA2Q15822 529 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 V9GYY5 206 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 ZNF165P49910 485 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 POGZQ7Z3K3 1410 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 MTHFSDQ2M296 383 aaKnown RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 HSP90B2PQ58FF3 399 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 MTERF4Q7Z6M4 381 aaKnown RBP15.36■□□□□ 0.05
PRDM16-208ENST00000514189 CEP89Q96ST8 783 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 ZMYND15Q9H091 742 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 A2MP01023 1474 aa15.36■□□□□ 0.05
PRDM16-208ENST00000514189 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 BRF1Q92994 677 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 ESYT1Q9BSJ8 1104 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 PZPP20742 1482 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 ABCC10Q5T3U5 1492 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
PRDM16-208ENST00000514189 ATP2B2Q01814 1243 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
PRDM16-208ENST00000514189 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-208ENST00000514189 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
PRDM16-208ENST00000514189 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
PRDM16-208ENST00000514189 DNMT1P26358 1616 aaKnown RBP15.34■□□□□ 0.05
PRDM16-208ENST00000514189 TDO2P48775 406 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 DCTPP1Q9H773 170 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-208ENST00000514189 TNNT1P13805 278 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 DHX8Q14562 1220 aaKnown RBP15.34■□□□□ 0.05
PRDM16-208ENST00000514189 KIF6Q6ZMV9 814 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 OFD1O75665 1012 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 SHANK2Q9UPX8 1470 aa15.34■□□□□ 0.05
PRDM16-208ENST00000514189 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.05
PRDM16-208ENST00000514189 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.05
PRDM16-208ENST00000514189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.05
PRDM16-208ENST00000514189 ZSWIM4Q9H7M6 989 aa15.33■□□□□ 0.04
PRDM16-208ENST00000514189 PTPN14Q15678 1187 aa15.33■□□□□ 0.04
PRDM16-208ENST00000514189 METTL24Q5JXM2 366 aa15.33■□□□□ 0.04
PRDM16-208ENST00000514189 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
PRDM16-208ENST00000514189 AMOTL1Q8IY63 956 aa15.33■□□□□ 0.04
PRDM16-208ENST00000514189 PHF8Q9UPP1 1060 aa15.33■□□□□ 0.04
PRDM16-208ENST00000514189 PKP1Q13835 747 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-208ENST00000514189 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 URI1O94763 535 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-208ENST00000514189 LRSAM1Q6UWE0 723 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 XBP1P17861 261 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 TRIM22Q8IYM9 498 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 CCDC47Q96A33 483 aaKnown RBP15.32■□□□□ 0.04
PRDM16-208ENST00000514189 RBSNQ9H1K0 784 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 LRP2BPQ9P2M1 347 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-208ENST00000514189 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 PTPRCP08575 1304 aa15.32■□□□□ 0.04
PRDM16-208ENST00000514189 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
PRDM16-208ENST00000514189 C8orf76Q96K31 380 aa15.31■□□□□ 0.04
PRDM16-208ENST00000514189 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
PRDM16-208ENST00000514189 NUTM2BA6NNL0 878 aaPredicted RBP15.31■□□□□ 0.04
PRDM16-208ENST00000514189 NUTM2EB1AL46 878 aaPredicted RBP15.31■□□□□ 0.04
PRDM16-208ENST00000514189 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
PRDM16-208ENST00000514189 NUTM2AQ8IVF1 878 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms