RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ZBTB7CA1YPR0 619 aa12.68□□□□□ -0.38
TPM3-221ENST00000513769 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
TPM3-221ENST00000513769 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
TPM3-221ENST00000513769 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
TPM3-221ENST00000513769 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
TPM3-221ENST00000513769 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
TPM3-221ENST00000513769 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 BCAR3O75815 825 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
TPM3-221ENST00000513769 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 EVA1CP58658 441 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
TPM3-221ENST00000513769 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
TPM3-221ENST00000513769 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
TPM3-221ENST00000513769 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
TPM3-221ENST00000513769 COL18A1P39060 1754 aa12.66□□□□□ -0.38
TPM3-221ENST00000513769 WDR17Q8IZU2 1322 aa12.66□□□□□ -0.38
TPM3-221ENST00000513769 MCM10Q7L590 875 aa12.66□□□□□ -0.38
TPM3-221ENST00000513769 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
TPM3-221ENST00000513769 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
TPM3-221ENST00000513769 CRB1P82279 1406 aa12.65□□□□□ -0.38
TPM3-221ENST00000513769 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
TPM3-221ENST00000513769 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
TPM3-221ENST00000513769 ZKSCAN2Q63HK3 967 aa12.65□□□□□ -0.38
TPM3-221ENST00000513769 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
TPM3-221ENST00000513769 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
TPM3-221ENST00000513769 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
TPM3-221ENST00000513769 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
TPM3-221ENST00000513769 RGS12O14924 1447 aa12.64□□□□□ -0.39
TPM3-221ENST00000513769 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
TPM3-221ENST00000513769 USP21Q9UK80 565 aa12.64□□□□□ -0.39
TPM3-221ENST00000513769 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 PLIN1O60240 522 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 HOXB7P09629 217 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
TPM3-221ENST00000513769 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
TPM3-221ENST00000513769 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
TPM3-221ENST00000513769 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
TPM3-221ENST00000513769 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
TPM3-221ENST00000513769 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
TPM3-221ENST00000513769 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
TPM3-221ENST00000513769 TEFQ10587 303 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
TPM3-221ENST00000513769 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
TPM3-221ENST00000513769 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
TPM3-221ENST00000513769 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
TPM3-221ENST00000513769 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
TPM3-221ENST00000513769 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
TPM3-221ENST00000513769 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
TPM3-221ENST00000513769 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
TPM3-221ENST00000513769 IL2RBP14784 551 aa12.6□□□□□ -0.39
TPM3-221ENST00000513769 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
TPM3-221ENST00000513769 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
TPM3-221ENST00000513769 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
TPM3-221ENST00000513769 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
TPM3-221ENST00000513769 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
TPM3-221ENST00000513769 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
TPM3-221ENST00000513769 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
TPM3-221ENST00000513769 PHKG2P15735 406 aa12.59□□□□□ -0.39
TPM3-221ENST00000513769 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
TPM3-221ENST00000513769 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
TPM3-221ENST00000513769 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
TPM3-221ENST00000513769 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
TPM3-221ENST00000513769 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
TPM3-221ENST00000513769 RGPD5Q99666 1765 aa12.58□□□□□ -0.39
TPM3-221ENST00000513769 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 SLC34A2O95436 690 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
TPM3-221ENST00000513769 CRBNQ96SW2 442 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 COL5A2P05997 1499 aaPredicted RBP12.58□□□□□ -0.4
TPM3-221ENST00000513769 PTPRCP08575 1304 aa12.58□□□□□ -0.4
TPM3-221ENST00000513769 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
TPM3-221ENST00000513769 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
TPM3-221ENST00000513769 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
TPM3-221ENST00000513769 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
TPM3-221ENST00000513769 NUDT7P0C024 238 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
TPM3-221ENST00000513769 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
TPM3-221ENST00000513769 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
TPM3-221ENST00000513769 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
TPM3-221ENST00000513769 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
TPM3-221ENST00000513769 TRIM27P14373 513 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms