RNA–Protein interactions for RNA: ENST00000513609.1

CSF1R-206, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-206ENST00000513609 NFIXQ14938 502 aa17.81■□□□□ 0.44
CSF1R-206ENST00000513609 TEX13AQ9BXU3 409 aaPredicted RBP17.81■□□□□ 0.44
CSF1R-206ENST00000513609 RNF181Q9P0P0 153 aa17.81■□□□□ 0.44
CSF1R-206ENST00000513609 UBR3Q6ZT12 1888 aa17.81■□□□□ 0.44
CSF1R-206ENST00000513609 NPHP1O15259 732 aa17.8■□□□□ 0.44
CSF1R-206ENST00000513609 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
CSF1R-206ENST00000513609 SERPINB2P05120 415 aa17.79■□□□□ 0.44
CSF1R-206ENST00000513609 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
CSF1R-206ENST00000513609 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
CSF1R-206ENST00000513609 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
CSF1R-206ENST00000513609 H0YIN7 160 aa17.78■□□□□ 0.44
CSF1R-206ENST00000513609 ZNF790Q6PG37 636 aa17.78■□□□□ 0.44
CSF1R-206ENST00000513609 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
CSF1R-206ENST00000513609 APLP1P51693 650 aa17.77■□□□□ 0.44
CSF1R-206ENST00000513609 C2CD5Q86YS7 1000 aa17.77■□□□□ 0.44
CSF1R-206ENST00000513609 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.44
CSF1R-206ENST00000513609 ZNF496Q96IT1 587 aaPredicted RBP17.77■□□□□ 0.44
CSF1R-206ENST00000513609 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
CSF1R-206ENST00000513609 COL15A1P39059 1388 aa17.77■□□□□ 0.43
CSF1R-206ENST00000513609 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
CSF1R-206ENST00000513609 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
CSF1R-206ENST00000513609 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
CSF1R-206ENST00000513609 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
CSF1R-206ENST00000513609 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
CSF1R-206ENST00000513609 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.43
CSF1R-206ENST00000513609 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
CSF1R-206ENST00000513609 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
CSF1R-206ENST00000513609 BCL2L12Q9HB09 334 aa17.74■□□□□ 0.43
CSF1R-206ENST00000513609 RRAGCQ9HB90 399 aa17.74■□□□□ 0.43
CSF1R-206ENST00000513609 A1BGP04217 495 aa17.73■□□□□ 0.43
CSF1R-206ENST00000513609 PHACTR3Q96KR7 559 aa17.73■□□□□ 0.43
CSF1R-206ENST00000513609 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
CSF1R-206ENST00000513609 NPC1L1Q9UHC9 1359 aa17.73■□□□□ 0.43
CSF1R-206ENST00000513609 PDE6BP35913 854 aa17.72■□□□□ 0.43
CSF1R-206ENST00000513609 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
CSF1R-206ENST00000513609 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
CSF1R-206ENST00000513609 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
CSF1R-206ENST00000513609 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
CSF1R-206ENST00000513609 LMNB1P20700 586 aa17.71■□□□□ 0.43
CSF1R-206ENST00000513609 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
CSF1R-206ENST00000513609 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.42
CSF1R-206ENST00000513609 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 NEFMP07197 916 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 RASSF7Q02833 373 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
CSF1R-206ENST00000513609 FSTL1Q12841 308 aa17.69■□□□□ 0.42
CSF1R-206ENST00000513609 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
CSF1R-206ENST00000513609 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
CSF1R-206ENST00000513609 KCNQ3O43525 872 aa17.68■□□□□ 0.42
CSF1R-206ENST00000513609 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
CSF1R-206ENST00000513609 MCM10Q7L590 875 aa17.68■□□□□ 0.42
CSF1R-206ENST00000513609 DZIP3Q86Y13 1208 aaKnown RBP17.68■□□□□ 0.42
CSF1R-206ENST00000513609 C21orf2O43822 256 aa17.67■□□□□ 0.42
CSF1R-206ENST00000513609 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
CSF1R-206ENST00000513609 ST5P78524 1137 aa17.67■□□□□ 0.42
CSF1R-206ENST00000513609 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
CSF1R-206ENST00000513609 CNBD1Q8NA66 436 aa17.67■□□□□ 0.42
CSF1R-206ENST00000513609 VEGFAP15692 232 aaPredicted RBP17.66■□□□□ 0.42
CSF1R-206ENST00000513609 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
CSF1R-206ENST00000513609 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
CSF1R-206ENST00000513609 MRC1P22897 1456 aa17.66■□□□□ 0.42
CSF1R-206ENST00000513609 KCPQ6ZWJ8 1503 aa17.66■□□□□ 0.42
CSF1R-206ENST00000513609 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
CSF1R-206ENST00000513609 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
CSF1R-206ENST00000513609 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
CSF1R-206ENST00000513609 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
CSF1R-206ENST00000513609 SMC1BQ8NDV3 1235 aa17.65■□□□□ 0.42
CSF1R-206ENST00000513609 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
CSF1R-206ENST00000513609 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.41
CSF1R-206ENST00000513609 GLTPD2A6NH11 291 aa17.64■□□□□ 0.41
CSF1R-206ENST00000513609 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
CSF1R-206ENST00000513609 ZC3H4Q9UPT8 1303 aaKnown RBP17.64■□□□□ 0.41
CSF1R-206ENST00000513609 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
CSF1R-206ENST00000513609 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
CSF1R-206ENST00000513609 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
CSF1R-206ENST00000513609 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
CSF1R-206ENST00000513609 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
CSF1R-206ENST00000513609 DNAJC5GQ8N7S2 189 aa17.63■□□□□ 0.41
CSF1R-206ENST00000513609 MYH14Q7Z406 1995 aaKnown RBP17.62■□□□□ 0.41
CSF1R-206ENST00000513609 HTRA3P83110 453 aa17.62■□□□□ 0.41
CSF1R-206ENST00000513609 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
CSF1R-206ENST00000513609 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
CSF1R-206ENST00000513609 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 CLEC4GQ6UXB4 293 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 TJP1Q07157 1748 aa17.61■□□□□ 0.41
CSF1R-206ENST00000513609 NFKBIEO00221 500 aa17.6■□□□□ 0.41
CSF1R-206ENST00000513609 SOGA3Q5TF21 947 aa17.6■□□□□ 0.41
CSF1R-206ENST00000513609 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
CSF1R-206ENST00000513609 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
CSF1R-206ENST00000513609 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
CSF1R-206ENST00000513609 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
CSF1R-206ENST00000513609 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
CSF1R-206ENST00000513609 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
CSF1R-206ENST00000513609 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms