RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 CDK2AP1O14519 115 aa11.36□□□□□ -0.59
RFC1-214ENST00000512726 BRD2P25440 801 aaKnown RBP11.36□□□□□ -0.59
RFC1-214ENST00000512726 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
RFC1-214ENST00000512726 FAM129BQ96TA1 746 aa11.36□□□□□ -0.59
RFC1-214ENST00000512726 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
RFC1-214ENST00000512726 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
RFC1-214ENST00000512726 RAB6BQ9NRW1 208 aa11.36□□□□□ -0.59
RFC1-214ENST00000512726 TLR1Q15399 786 aa11.35□□□□□ -0.59
RFC1-214ENST00000512726 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
RFC1-214ENST00000512726 PARP2Q9UGN5 583 aa11.35□□□□□ -0.59
RFC1-214ENST00000512726 ADD1P35611 737 aaKnown RBP11.34□□□□□ -0.59
RFC1-214ENST00000512726 ALKBH8Q96BT7 664 aaKnown RBP11.34□□□□□ -0.59
RFC1-214ENST00000512726 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
RFC1-214ENST00000512726 SERTM1A2A2V5 107 aa11.33□□□□□ -0.6
RFC1-214ENST00000512726 ITGBL1O95965 494 aaPredicted RBP11.33□□□□□ -0.6
RFC1-214ENST00000512726 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
RFC1-214ENST00000512726 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
RFC1-214ENST00000512726 GPR182O15218 404 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 SIAH2O43255 324 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 IL2RAP01589 272 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 USP5P45974 858 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
RFC1-214ENST00000512726 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
RFC1-214ENST00000512726 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 NGLY1Q96IV0 654 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 ESYT1Q9BSJ8 1104 aa11.32□□□□□ -0.6
RFC1-214ENST00000512726 SORBS3O60504 671 aa11.31□□□□□ -0.6
RFC1-214ENST00000512726 IGHA2P01877 340 aa11.31□□□□□ -0.6
RFC1-214ENST00000512726 PSMD2Q13200 908 aa11.31□□□□□ -0.6
RFC1-214ENST00000512726 POTEAQ6S8J7 498 aa11.31□□□□□ -0.6
RFC1-214ENST00000512726 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
RFC1-214ENST00000512726 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
RFC1-214ENST00000512726 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
RFC1-214ENST00000512726 ZBTB39O15060 712 aa11.3□□□□□ -0.6
RFC1-214ENST00000512726 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
RFC1-214ENST00000512726 TEAD4Q15561 434 aa11.3□□□□□ -0.6
RFC1-214ENST00000512726 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
RFC1-214ENST00000512726 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
RFC1-214ENST00000512726 NR3C2P08235 984 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 MZF1P28698 734 aaPredicted RBP11.29□□□□□ -0.6
RFC1-214ENST00000512726 DAB2P98082 770 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 ALG1LQ6GMV1 187 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 VTI1BQ9UEU0 232 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 POLIQ9UNA4 740 aa11.29□□□□□ -0.6
RFC1-214ENST00000512726 EML1O00423 815 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 ADH1AP07327 375 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 NOS2P35228 1153 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 RTN1Q16799 776 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 GJD3Q8N144 294 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 UBXN4Q92575 508 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 USP3Q9Y6I4 520 aa11.28□□□□□ -0.6
RFC1-214ENST00000512726 PCSK2P16519 638 aa11.27□□□□□ -0.61
RFC1-214ENST00000512726 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
RFC1-214ENST00000512726 CLN3Q13286 438 aa11.27□□□□□ -0.61
RFC1-214ENST00000512726 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
RFC1-214ENST00000512726 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
RFC1-214ENST00000512726 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
RFC1-214ENST00000512726 PPP1R1BQ9UD71 204 aaPredicted RBP11.27□□□□□ -0.61
RFC1-214ENST00000512726 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
RFC1-214ENST00000512726 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
RFC1-214ENST00000512726 WNT7AO00755 349 aa11.26□□□□□ -0.61
RFC1-214ENST00000512726 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
RFC1-214ENST00000512726 DGKZQ13574 1117 aa11.26□□□□□ -0.61
RFC1-214ENST00000512726 HCN4Q9Y3Q4 1203 aa11.26□□□□□ -0.61
RFC1-214ENST00000512726 ZAP70P43403 619 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 FAM26DQ5JW98 314 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 PIK3R5Q8WYR1 880 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 EDEM1Q92611 657 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 L3MBTL2Q969R5 705 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
RFC1-214ENST00000512726 PDGFAP04085 211 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 CENPCQ03188 943 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 SH3PXD2AQ5TCZ1 1133 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 ZDHHC1Q8WTX9 485 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 RNF34Q969K3 372 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 MRGPRX2Q96LB1 330 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
RFC1-214ENST00000512726 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
RFC1-214ENST00000512726 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
RFC1-214ENST00000512726 TTC16Q8NEE8 873 aa11.23□□□□□ -0.61
RFC1-214ENST00000512726 FBF1Q8TES7 1133 aa11.23□□□□□ -0.61
RFC1-214ENST00000512726 PHACTR1Q9C0D0 580 aa11.23□□□□□ -0.61
RFC1-214ENST00000512726 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
RFC1-214ENST00000512726 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
RFC1-214ENST00000512726 NEFLP07196 543 aa11.22□□□□□ -0.61
RFC1-214ENST00000512726 METTL16Q86W50 562 aaKnown RBP11.22□□□□□ -0.61
RFC1-214ENST00000512726 SETDB2Q96T68 719 aa11.22□□□□□ -0.61
RFC1-214ENST00000512726 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms