RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
NEDD9-213ENST00000512665 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
NEDD9-213ENST00000512665 BEGAINQ9BUH8 593 aa13.99□□□□□ -0.17
NEDD9-213ENST00000512665 FLT4P35916 1363 aa13.98□□□□□ -0.17
NEDD9-213ENST00000512665 FER1L6Q2WGJ9 1857 aa13.98□□□□□ -0.17
NEDD9-213ENST00000512665 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
NEDD9-213ENST00000512665 TAF1DQ9H5J8 278 aaPredicted RBP13.98□□□□□ -0.17
NEDD9-213ENST00000512665 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
NEDD9-213ENST00000512665 CA12O43570 354 aa13.97□□□□□ -0.17
NEDD9-213ENST00000512665 TONSLQ96HA7 1378 aa13.96□□□□□ -0.17
NEDD9-213ENST00000512665 FBLN1P23142 703 aa13.96□□□□□ -0.17
NEDD9-213ENST00000512665 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
NEDD9-213ENST00000512665 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
NEDD9-213ENST00000512665 SRP68Q9UHB9 627 aaKnown RBP13.96□□□□□ -0.17
NEDD9-213ENST00000512665 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
NEDD9-213ENST00000512665 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
NEDD9-213ENST00000512665 ECE1P42892 770 aa13.95□□□□□ -0.18
NEDD9-213ENST00000512665 PHKG2P15735 406 aa13.94□□□□□ -0.18
NEDD9-213ENST00000512665 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
NEDD9-213ENST00000512665 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
NEDD9-213ENST00000512665 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
NEDD9-213ENST00000512665 MAP2K2P36507 400 aa13.92□□□□□ -0.18
NEDD9-213ENST00000512665 CRKLP46109 303 aaKnown RBP13.92□□□□□ -0.18
NEDD9-213ENST00000512665 CAPNS2Q96L46 248 aa13.92□□□□□ -0.18
NEDD9-213ENST00000512665 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
NEDD9-213ENST00000512665 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
NEDD9-213ENST00000512665 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
NEDD9-213ENST00000512665 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
NEDD9-213ENST00000512665 H0YIN7 160 aa13.91□□□□□ -0.18
NEDD9-213ENST00000512665 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
NEDD9-213ENST00000512665 C2CD5Q86YS7 1000 aa13.91□□□□□ -0.18
NEDD9-213ENST00000512665 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
NEDD9-213ENST00000512665 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
NEDD9-213ENST00000512665 CNTROBQ8N137 903 aa13.9□□□□□ -0.18
NEDD9-213ENST00000512665 TJP1Q07157 1748 aa13.9□□□□□ -0.18
NEDD9-213ENST00000512665 DGKZQ13574 1117 aa13.89□□□□□ -0.19
NEDD9-213ENST00000512665 NFIXQ14938 502 aa13.89□□□□□ -0.19
NEDD9-213ENST00000512665 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
NEDD9-213ENST00000512665 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
NEDD9-213ENST00000512665 ZPR1O75312 459 aa13.88□□□□□ -0.19
NEDD9-213ENST00000512665 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
NEDD9-213ENST00000512665 CARMIL3Q8ND23 1372 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 C21orf2O43822 256 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 EPHX2P34913 555 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-213ENST00000512665 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
NEDD9-213ENST00000512665 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
NEDD9-213ENST00000512665 FYB1O15117 783 aa13.86□□□□□ -0.19
NEDD9-213ENST00000512665 SERPINB2P05120 415 aa13.86□□□□□ -0.19
NEDD9-213ENST00000512665 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 MAP1SQ66K74 1059 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 TSKSQ9UJT2 592 aa13.86□□□□□ -0.19
NEDD9-213ENST00000512665 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
NEDD9-213ENST00000512665 CASP8AP2Q9UKL3 1982 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 CYP4F22Q6NT55 531 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 NARFQ9UHQ1 456 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 TLL2Q9Y6L7 1015 aa13.85□□□□□ -0.19
NEDD9-213ENST00000512665 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
NEDD9-213ENST00000512665 PDE6BP35913 854 aa13.83□□□□□ -0.2
NEDD9-213ENST00000512665 SOX10P56693 466 aa13.83□□□□□ -0.2
NEDD9-213ENST00000512665 BRIP1Q9BX63 1249 aa13.83□□□□□ -0.2
NEDD9-213ENST00000512665 TRPM7Q96QT4 1865 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
NEDD9-213ENST00000512665 EYA1Q99502 592 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 GGNBP2Q9H3C7 697 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 COL15A1P39059 1388 aa13.82□□□□□ -0.2
NEDD9-213ENST00000512665 PTCD1O75127 700 aaKnown RBP13.81□□□□□ -0.2
NEDD9-213ENST00000512665 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
NEDD9-213ENST00000512665 ZNF622Q969S3 477 aaKnown RBP eCLIP13.81□□□□□ -0.2
NEDD9-213ENST00000512665 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
NEDD9-213ENST00000512665 CABP4P57796 275 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 CST9Q5W186 159 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
NEDD9-213ENST00000512665 AOC2O75106 756 aa13.79□□□□□ -0.2
NEDD9-213ENST00000512665 HABP4Q5JVS0 413 aaKnown RBP13.79□□□□□ -0.2
NEDD9-213ENST00000512665 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
NEDD9-213ENST00000512665 GPC2Q8N158 579 aa13.79□□□□□ -0.2
NEDD9-213ENST00000512665 RNF123Q5XPI4 1314 aa13.79□□□□□ -0.2
NEDD9-213ENST00000512665 FZD9O00144 591 aa13.78□□□□□ -0.2
NEDD9-213ENST00000512665 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
NEDD9-213ENST00000512665 GRM1Q13255 1194 aa13.78□□□□□ -0.2
NEDD9-213ENST00000512665 SAPCD2Q86UD0 394 aa13.78□□□□□ -0.2
NEDD9-213ENST00000512665 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
NEDD9-213ENST00000512665 BCORQ6W2J9 1755 aa13.77□□□□□ -0.21
NEDD9-213ENST00000512665 C7orf43Q8WVR3 580 aa13.77□□□□□ -0.21
NEDD9-213ENST00000512665 SRGNP10124 158 aa13.76□□□□□ -0.21
NEDD9-213ENST00000512665 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms