RNA–Protein interactions for RNA: ENST00000512553.5

ITGA3-213, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-213ENST00000512553 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
ITGA3-213ENST00000512553 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
ITGA3-213ENST00000512553 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
ITGA3-213ENST00000512553 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
ITGA3-213ENST00000512553 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
ITGA3-213ENST00000512553 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
ITGA3-213ENST00000512553 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
ITGA3-213ENST00000512553 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
ITGA3-213ENST00000512553 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
ITGA3-213ENST00000512553 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
ITGA3-213ENST00000512553 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
ITGA3-213ENST00000512553 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
ITGA3-213ENST00000512553 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
ITGA3-213ENST00000512553 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
ITGA3-213ENST00000512553 GIGYF1O75420 1035 aaPredicted RBP12.48□□□□□ -0.41
ITGA3-213ENST00000512553 RALBP1Q15311 655 aa12.48□□□□□ -0.41
ITGA3-213ENST00000512553 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
ITGA3-213ENST00000512553 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
ITGA3-213ENST00000512553 ADCY9O60503 1353 aa12.47□□□□□ -0.41
ITGA3-213ENST00000512553 FKBP8Q14318 412 aa12.47□□□□□ -0.41
ITGA3-213ENST00000512553 USPL1Q5W0Q7 1092 aa12.47□□□□□ -0.41
ITGA3-213ENST00000512553 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
ITGA3-213ENST00000512553 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
ITGA3-213ENST00000512553 KDM3BQ7LBC6 1761 aa12.47□□□□□ -0.41
ITGA3-213ENST00000512553 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
ITGA3-213ENST00000512553 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
ITGA3-213ENST00000512553 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
ITGA3-213ENST00000512553 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
ITGA3-213ENST00000512553 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
ITGA3-213ENST00000512553 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
ITGA3-213ENST00000512553 TM4SF1P30408 202 aa12.45□□□□□ -0.42
ITGA3-213ENST00000512553 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
ITGA3-213ENST00000512553 DDR1Q08345 913 aa12.45□□□□□ -0.42
ITGA3-213ENST00000512553 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
ITGA3-213ENST00000512553 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
ITGA3-213ENST00000512553 BCS1LQ9Y276 419 aa12.45□□□□□ -0.42
ITGA3-213ENST00000512553 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
ITGA3-213ENST00000512553 DPEP1P16444 411 aa12.44□□□□□ -0.42
ITGA3-213ENST00000512553 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
ITGA3-213ENST00000512553 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
ITGA3-213ENST00000512553 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 RGL2O15211 777 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 NFIXQ14938 502 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 MCM10Q7L590 875 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
ITGA3-213ENST00000512553 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
ITGA3-213ENST00000512553 C1QTNF8P60827 252 aa12.42□□□□□ -0.42
ITGA3-213ENST00000512553 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
ITGA3-213ENST00000512553 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
ITGA3-213ENST00000512553 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
ITGA3-213ENST00000512553 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 SBF1O95248 1867 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 SERPINB2P05120 415 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 LMOD3Q0VAK6 560 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 ANKRD31Q8N7Z5 1873 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
ITGA3-213ENST00000512553 NPHP1O15259 732 aa12.4□□□□□ -0.42
ITGA3-213ENST00000512553 CLEC4GQ6UXB4 293 aa12.4□□□□□ -0.42
ITGA3-213ENST00000512553 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
ITGA3-213ENST00000512553 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
ITGA3-213ENST00000512553 TNRC6CQ9HCJ0 1690 aaKnown RBP12.39□□□□□ -0.43
ITGA3-213ENST00000512553 H0YIN7 160 aa12.39□□□□□ -0.43
ITGA3-213ENST00000512553 PDE6BP35913 854 aa12.39□□□□□ -0.43
ITGA3-213ENST00000512553 ST5P78524 1137 aa12.39□□□□□ -0.43
ITGA3-213ENST00000512553 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
ITGA3-213ENST00000512553 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
ITGA3-213ENST00000512553 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
ITGA3-213ENST00000512553 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
ITGA3-213ENST00000512553 COL11A2P13942 1736 aaPredicted RBP12.38□□□□□ -0.43
ITGA3-213ENST00000512553 A1BGP04217 495 aa12.38□□□□□ -0.43
ITGA3-213ENST00000512553 KCNA3P22001 575 aa12.38□□□□□ -0.43
ITGA3-213ENST00000512553 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
ITGA3-213ENST00000512553 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
ITGA3-213ENST00000512553 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
ITGA3-213ENST00000512553 KCNQ3O43525 872 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 CAMTA2O94983 1202 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 CHRNA5P30532 468 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
ITGA3-213ENST00000512553 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 WDR43Q15061 677 aaKnown RBP eCLIP12.37□□□□□ -0.43
ITGA3-213ENST00000512553 TBC1D9BQ66K14 1250 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 TTLL6Q8N841 843 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
ITGA3-213ENST00000512553 NUP98P52948 1817 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
ITGA3-213ENST00000512553 SENP3-EIF4A1A0A087X0R7 540 aa12.36□□□□□ -0.43
ITGA3-213ENST00000512553 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
ITGA3-213ENST00000512553 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
ITGA3-213ENST00000512553 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
ITGA3-213ENST00000512553 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
ITGA3-213ENST00000512553 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
ITGA3-213ENST00000512553 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
ITGA3-213ENST00000512553 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
ITGA3-213ENST00000512553 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms