RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 FCHSD2O94868 740 aa19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 KCNA3P22001 575 aa19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 TM4SF1P30408 202 aa19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 IL17REQ8NFR9 667 aa19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 NARFQ9UHQ1 456 aa19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 SIPA1L3O60292 1781 aaPredicted RBP19.74■□□□□ 0.75
CCHCR1-229ENST00000512418 PIM2Q9P1W9 311 aa19.73■□□□□ 0.75
CCHCR1-229ENST00000512418 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
CCHCR1-229ENST00000512418 STARD3NLO95772 234 aa19.72■□□□□ 0.75
CCHCR1-229ENST00000512418 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
CCHCR1-229ENST00000512418 ZNF790Q6PG37 636 aa19.72■□□□□ 0.75
CCHCR1-229ENST00000512418 CEMIPQ8WUJ3 1361 aa19.71■□□□□ 0.75
CCHCR1-229ENST00000512418 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
CCHCR1-229ENST00000512418 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
CCHCR1-229ENST00000512418 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
CCHCR1-229ENST00000512418 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
CCHCR1-229ENST00000512418 HEG1Q9ULI3 1381 aa19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 NFIXQ14938 502 aa19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 NRXN2Q9P2S2 1712 aa19.7■□□□□ 0.74
CCHCR1-229ENST00000512418 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-229ENST00000512418 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
CCHCR1-229ENST00000512418 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-229ENST00000512418 CEP350Q5VT06 3117 aa19.69■□□□□ 0.74
CCHCR1-229ENST00000512418 CHRNA5P30532 468 aa19.68■□□□□ 0.74
CCHCR1-229ENST00000512418 EIF5P55010 431 aaKnown RBP19.68■□□□□ 0.74
CCHCR1-229ENST00000512418 BCL2L12Q9HB09 334 aa19.68■□□□□ 0.74
CCHCR1-229ENST00000512418 A0A087WZG4 1122 aa19.67■□□□□ 0.74
CCHCR1-229ENST00000512418 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
CCHCR1-229ENST00000512418 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCHCR1-229ENST00000512418 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
CCHCR1-229ENST00000512418 KIF3CO14782 793 aa19.66■□□□□ 0.74
CCHCR1-229ENST00000512418 SCN7AQ01118 1682 aa19.65■□□□□ 0.74
CCHCR1-229ENST00000512418 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
CCHCR1-229ENST00000512418 SERPINB2P05120 415 aa19.65■□□□□ 0.74
CCHCR1-229ENST00000512418 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
CCHCR1-229ENST00000512418 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
CCHCR1-229ENST00000512418 DLEC1Q9Y238 1755 aa19.63■□□□□ 0.73
CCHCR1-229ENST00000512418 C9orf131Q5VYM1 1079 aa19.63■□□□□ 0.73
CCHCR1-229ENST00000512418 HSPA6P17066 643 aa19.62■□□□□ 0.73
CCHCR1-229ENST00000512418 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-229ENST00000512418 ZNF330Q9Y3S2 320 aaPredicted RBP19.62■□□□□ 0.73
CCHCR1-229ENST00000512418 KCNQ3O43525 872 aa19.61■□□□□ 0.73
CCHCR1-229ENST00000512418 BICDL1Q6ZP65 573 aa19.61■□□□□ 0.73
CCHCR1-229ENST00000512418 CARMIL3Q8ND23 1372 aa19.6■□□□□ 0.73
CCHCR1-229ENST00000512418 A1BGP04217 495 aa19.6■□□□□ 0.73
CCHCR1-229ENST00000512418 TBC1D9BQ66K14 1250 aa19.6■□□□□ 0.73
CCHCR1-229ENST00000512418 MCM10Q7L590 875 aa19.6■□□□□ 0.73
CCHCR1-229ENST00000512418 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
CCHCR1-229ENST00000512418 HTATSF1O43719 755 aaKnown RBP19.59■□□□□ 0.73
CCHCR1-229ENST00000512418 RNF181Q9P0P0 153 aa19.59■□□□□ 0.73
CCHCR1-229ENST00000512418 H0YIN7 160 aa19.58■□□□□ 0.72
CCHCR1-229ENST00000512418 TOMM70O94826 608 aa19.58■□□□□ 0.72
CCHCR1-229ENST00000512418 C2CD5Q86YS7 1000 aa19.58■□□□□ 0.72
CCHCR1-229ENST00000512418 SBF1O95248 1867 aa19.58■□□□□ 0.72
CCHCR1-229ENST00000512418 BCORQ6W2J9 1755 aa19.57■□□□□ 0.72
CCHCR1-229ENST00000512418 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
CCHCR1-229ENST00000512418 TTLL6Q8N841 843 aa19.57■□□□□ 0.72
CCHCR1-229ENST00000512418 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
CCHCR1-229ENST00000512418 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
CCHCR1-229ENST00000512418 ANKRD31Q8N7Z5 1873 aa19.56■□□□□ 0.72
CCHCR1-229ENST00000512418 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
CCHCR1-229ENST00000512418 DCTN1Q14203 1278 aa19.56■□□□□ 0.72
CCHCR1-229ENST00000512418 BRIP1Q9BX63 1249 aa19.56■□□□□ 0.72
CCHCR1-229ENST00000512418 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
CCHCR1-229ENST00000512418 KDM2BQ8NHM5 1336 aa19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 ZC3H4Q9UPT8 1303 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 NEFMP07197 916 aa19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 PRR5LQ6MZQ0 368 aa19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 DZIP3Q86Y13 1208 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
CCHCR1-229ENST00000512418 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
CCHCR1-229ENST00000512418 PDE6BP35913 854 aa19.54■□□□□ 0.72
CCHCR1-229ENST00000512418 RASSF7Q02833 373 aa19.54■□□□□ 0.72
CCHCR1-229ENST00000512418 CNBD1Q8NA66 436 aa19.53■□□□□ 0.72
CCHCR1-229ENST00000512418 COL11A2P13942 1736 aaPredicted RBP19.53■□□□□ 0.72
CCHCR1-229ENST00000512418 TNRC6CQ9HCJ0 1690 aaKnown RBP19.52■□□□□ 0.72
CCHCR1-229ENST00000512418 NPHP1O15259 732 aa19.52■□□□□ 0.72
CCHCR1-229ENST00000512418 LMNB1P20700 586 aa19.52■□□□□ 0.72
CCHCR1-229ENST00000512418 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
CCHCR1-229ENST00000512418 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.72
CCHCR1-229ENST00000512418 DLG5Q8TDM6 1919 aa19.51■□□□□ 0.71
CCHCR1-229ENST00000512418 ST5P78524 1137 aa19.51■□□□□ 0.71
CCHCR1-229ENST00000512418 CLEC4GQ6UXB4 293 aa19.51■□□□□ 0.71
CCHCR1-229ENST00000512418 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
CCHCR1-229ENST00000512418 ZNF622Q969S3 477 aaKnown RBP eCLIP19.51■□□□□ 0.714e-8■□□□□ 8.1
CCHCR1-229ENST00000512418 ZNF652Q9Y2D9 606 aa19.51■□□□□ 0.71
CCHCR1-229ENST00000512418 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
CCHCR1-229ENST00000512418 CCDC24Q8N4L8 307 aa19.5■□□□□ 0.71
CCHCR1-229ENST00000512418 RBM46Q8TBY0 533 aaKnown RBP19.5■□□□□ 0.71
CCHCR1-229ENST00000512418 NFKBIEO00221 500 aa19.49■□□□□ 0.71
CCHCR1-229ENST00000512418 RGL2O15211 777 aa19.49■□□□□ 0.71
CCHCR1-229ENST00000512418 APLP1P51693 650 aa19.49■□□□□ 0.71
CCHCR1-229ENST00000512418 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
CCHCR1-229ENST00000512418 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
CCHCR1-229ENST00000512418 TIAM2Q8IVF5 1701 aa19.48■□□□□ 0.71
CCHCR1-229ENST00000512418 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
CCHCR1-229ENST00000512418 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms