RNA–Protein interactions for RNA: ENST00000512375.1

MRPS18C-208, Transcript of mitochondrial ribosomal protein S18C, human

TSL 2

Gene MRPS18C, Length 2,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18C-208	ENST00000512375	DCAF5	Q96JK2	942 aa		13.62	□□□□□ -0.23
MRPS18C-208	ENST00000512375	MAP3K2	Q9Y2U5	619 aa		13.62	□□□□□ -0.23
MRPS18C-208	ENST00000512375	PKD1L3	Q7Z443	1732 aa		13.62	□□□□□ -0.23
MRPS18C-208	ENST00000512375	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SDS	P20132	328 aa		13.62	□□□□□ -0.23
MRPS18C-208	ENST00000512375	HYPK	Q9NX55	129 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	PLEKHG2	Q9H7P9	1386 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	WDR17	Q8IZU2	1322 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	PDE1A	P54750	535 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	KSR2	Q6VAB6	950 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	TOM1L2	Q6ZVM7	507 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	PPP1R42	Q7Z4L9	355 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SSH3	Q8TE77	659 aa		13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
MRPS18C-208	ENST00000512375	C5	P01031	1676 aa		13.6	□□□□□ -0.23
MRPS18C-208	ENST00000512375	AIMP1	Q12904	312 aa	Known RBP	13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	PDIA6	Q15084	440 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	TSHZ3	Q63HK5	1081 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	ZNF496	Q96IT1	587 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	OSBPL3	Q9H4L5	887 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SRGAP3	O43295	1099 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SPRYD3	Q8NCJ5	442 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	MRC1	P22897	1456 aa		13.59	□□□□□ -0.23
MRPS18C-208	ENST00000512375	HSP90AB1	P08238	724 aa	Known RBP	13.58	□□□□□ -0.23
MRPS18C-208	ENST00000512375	TTC5	Q8N0Z6	440 aa		13.58	□□□□□ -0.23
MRPS18C-208	ENST00000512375	SALL3	Q9BXA9	1300 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	COL5A2	P05997	1499 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	SURF6	O75683	361 aa	Known RBP	13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	MX1	P20591	662 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	POLA2	Q14181	598 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	CWF19L2	Q2TBE0	894 aa	Known RBP	13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	KIF2C	Q99661	725 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	ANTXR1	Q9H6X2	564 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	ABCA3	Q99758	1704 aa		13.58	□□□□□ -0.24
MRPS18C-208	ENST00000512375	ALDH1L1	O75891	902 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	DDX58	O95786	925 aa	Known RBP	13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	MYL6B	P14649	208 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	CABP4	P57796	275 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	HSCB	Q8IWL3	235 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	IL1RAPL2	Q9NP60	686 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	CASC1	Q6TDU7	716 aa		13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	PARP4	Q9UKK3	1724 aa	Known RBP	13.57	□□□□□ -0.24
MRPS18C-208	ENST00000512375	EIF5B	O60841	1220 aa	Known RBP	13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	FRAT2	O75474	233 aa	Predicted RBP	13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	SNRPA1	P09661	255 aa	Known RBP	13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	ZCRB1	Q8TBF4	217 aa	Known RBP	13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	STRN4	Q9NRL3	753 aa		13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	USP16	Q9Y5T5	823 aa		13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	PCDH11X	Q9BZA7	1347 aa		13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	PCDH11Y	Q9BZA8	1340 aa		13.56	□□□□□ -0.24
MRPS18C-208	ENST00000512375	DEK	P35659	375 aa	Known RBP	13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	LINS1	Q8NG48	757 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	FMNL2	Q96PY5	1086 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	NHSL1	Q5SYE7	1610 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	RAB11FIP3	O75154	756 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	RIC3	Q7Z5B4	369 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	SNX21	Q969T3	373 aa		13.55	□□□□□ -0.24
MRPS18C-208	ENST00000512375	PIP4K2A	P48426	406 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	RHPN1	Q8TCX5	695 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	XAGE3	Q8WTP9	111 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	TUBGCP6	Q96RT7	1819 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	IL2RB	P14784	551 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	LARP1	Q6PKG0	1096 aa	Known RBP	13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	COPS6	Q7L5N1	327 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	RBM42	Q9BTD8	480 aa	Known RBP	13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	CARD10	Q9BWT7	1032 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	USP26	Q9BXU7	913 aa		13.54	□□□□□ -0.24
MRPS18C-208	ENST00000512375	GRM8	O00222	908 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	EVA1C	P58658	441 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	MTX1	Q13505	466 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	NUTM1	Q86Y26	1132 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	KIF1BP	Q96EK5	621 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	STAP2	Q9UGK3	403 aa		13.53	□□□□□ -0.24
MRPS18C-208	ENST00000512375	TRIM6-TRIM34	B2RNG4	842 aa		13.52	□□□□□ -0.24
MRPS18C-208	ENST00000512375	IGKV5-2	P06315	115 aa		13.52	□□□□□ -0.24
MRPS18C-208	ENST00000512375	HDAC5	Q9UQL6	1122 aa		13.52	□□□□□ -0.24
MRPS18C-208	ENST00000512375	REC8	O95072	547 aa		13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	CD2BP2	O95400	341 aa	Known RBP	13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	NEXN	Q0ZGT2	675 aa		13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	OS9	Q13438	667 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	LRP10	Q7Z4F1	713 aa		13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	DDX54	Q8TDD1	881 aa	Known RBP	13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	RILPL2	Q969X0	211 aa		13.52	□□□□□ -0.25
MRPS18C-208	ENST00000512375	ERC2	O15083	957 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	HSP90AB4P	Q58FF6	505 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	SUCLG2	Q96I99	432 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	UTY	O14607	1347 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	GLI3	P10071	1580 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	ANKRD13D	Q6ZTN6	518 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	KAZALD1	Q96I82	304 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	MYD88	Q99836	296 aa		13.51	□□□□□ -0.25
MRPS18C-208	ENST00000512375	AOX1	Q06278	1338 aa		13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	NEURL1B	A8MQ27	555 aa		13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	UNC5CL	Q8IV45	518 aa		13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	METTL22	Q9BUU2	404 aa	Predicted RBP	13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	ERVV-2	B6SEH9	535 aa		13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	BICC1	Q9H694	974 aa	Known RBP	13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	PA2G4	Q9UQ80	394 aa	Known RBP	13.5	□□□□□ -0.25
MRPS18C-208	ENST00000512375	LAMB4	A4D0S4	1761 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms