RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
SMN2-211ENST00000511873 PCDHGC4Q9Y5F7 938 aa11.36□□□□□ -0.59
SMN2-211ENST00000511873 BMP4P12644 408 aa11.35□□□□□ -0.59
SMN2-211ENST00000511873 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
SMN2-211ENST00000511873 FGFR3P22607 806 aa11.35□□□□□ -0.59
SMN2-211ENST00000511873 PLEKHM2Q8IWE5 1019 aa11.35□□□□□ -0.59
SMN2-211ENST00000511873 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
SMN2-211ENST00000511873 ZDHHC3Q9NYG2 299 aa11.35□□□□□ -0.59
SMN2-211ENST00000511873 SCHIP1Q9P0W5 487 aaPredicted RBP11.35□□□□□ -0.59
SMN2-211ENST00000511873 A0A1W2PNR3 127 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 DNAAF2Q9NVR5 837 aaKnown RBP11.34□□□□□ -0.59
SMN2-211ENST00000511873 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
SMN2-211ENST00000511873 CNTNAP5Q8WYK1 1306 aa11.34□□□□□ -0.59
SMN2-211ENST00000511873 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
SMN2-211ENST00000511873 CTBSQ01459 385 aa11.33□□□□□ -0.6
SMN2-211ENST00000511873 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
SMN2-211ENST00000511873 GALNT6Q8NCL4 622 aa11.33□□□□□ -0.6
SMN2-211ENST00000511873 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
SMN2-211ENST00000511873 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
SMN2-211ENST00000511873 C2CD2LO14523 706 aa11.32□□□□□ -0.6
SMN2-211ENST00000511873 ZBTB7BO15156 539 aaPredicted RBP11.32□□□□□ -0.6
SMN2-211ENST00000511873 ATP9BO43861 1147 aa11.32□□□□□ -0.6
SMN2-211ENST00000511873 ATXN7O15265 892 aaPredicted RBP11.31□□□□□ -0.6
SMN2-211ENST00000511873 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 PROSER2Q86WR7 435 aaPredicted RBP11.31□□□□□ -0.6
SMN2-211ENST00000511873 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
SMN2-211ENST00000511873 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
SMN2-211ENST00000511873 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
SMN2-211ENST00000511873 L3MBTL2Q969R5 705 aa11.3□□□□□ -0.6
SMN2-211ENST00000511873 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
SMN2-211ENST00000511873 DNMT3AQ9Y6K1 912 aaPredicted RBP11.3□□□□□ -0.6
SMN2-211ENST00000511873 NOS2P35228 1153 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 EPHA4P54764 986 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 CLDN10P78369 228 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 FOXK2Q01167 660 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 TEAD4Q15561 434 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
SMN2-211ENST00000511873 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
SMN2-211ENST00000511873 SHISA8B8ZZ34 492 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 TXLNAP40222 546 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 GLMNQ92990 594 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
SMN2-211ENST00000511873 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
SMN2-211ENST00000511873 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.61
SMN2-211ENST00000511873 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
SMN2-211ENST00000511873 TNP2Q05952 138 aa11.27□□□□□ -0.61
SMN2-211ENST00000511873 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
SMN2-211ENST00000511873 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
SMN2-211ENST00000511873 GGA1Q9UJY5 639 aa11.27□□□□□ -0.61
SMN2-211ENST00000511873 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
SMN2-211ENST00000511873 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
SMN2-211ENST00000511873 ARAFP10398 606 aa11.25□□□□□ -0.61
SMN2-211ENST00000511873 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
SMN2-211ENST00000511873 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
SMN2-211ENST00000511873 SERTM1A2A2V5 107 aa11.24□□□□□ -0.61
SMN2-211ENST00000511873 CD33P20138 364 aa11.24□□□□□ -0.61
SMN2-211ENST00000511873 SNRPNP63162 240 aaKnown RBP11.24□□□□□ -0.61
SMN2-211ENST00000511873 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
SMN2-211ENST00000511873 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
SMN2-211ENST00000511873 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
SMN2-211ENST00000511873 AMPD1P23109 780 aa11.23□□□□□ -0.61
SMN2-211ENST00000511873 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
SMN2-211ENST00000511873 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
SMN2-211ENST00000511873 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
SMN2-211ENST00000511873 HCN2Q9UL51 889 aa11.23□□□□□ -0.61
SMN2-211ENST00000511873 NEURL1BA8MQ27 555 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 M0R2N6 131 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 EML1O00423 815 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 SAMD5Q5TGI4 173 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 SIX5Q8N196 739 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
SMN2-211ENST00000511873 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
SMN2-211ENST00000511873 MKL2Q9ULH7 1088 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
SMN2-211ENST00000511873 A6NJR5 290 aa11.21□□□□□ -0.61
SMN2-211ENST00000511873 EPXP11678 715 aa11.21□□□□□ -0.61
SMN2-211ENST00000511873 RASA1P20936 1047 aa11.21□□□□□ -0.61
SMN2-211ENST00000511873 PSMA6P60900 246 aaKnown RBP11.21□□□□□ -0.61
SMN2-211ENST00000511873 LRRC69Q6ZNQ3 347 aa11.21□□□□□ -0.61
SMN2-211ENST00000511873 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
SMN2-211ENST00000511873 IGHA1P01876 353 aa11.2□□□□□ -0.62
SMN2-211ENST00000511873 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
SMN2-211ENST00000511873 TSEN2Q8NCE0 465 aaKnown RBP11.2□□□□□ -0.62
SMN2-211ENST00000511873 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
SMN2-211ENST00000511873 PRR12Q9ULL5 1215 aa11.2□□□□□ -0.62
SMN2-211ENST00000511873 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
SMN2-211ENST00000511873 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms