RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
COPS4-210ENST00000511708 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
COPS4-210ENST00000511708 LBX1P52954 281 aa16.8■□□□□ 0.28
COPS4-210ENST00000511708 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
COPS4-210ENST00000511708 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
COPS4-210ENST00000511708 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
COPS4-210ENST00000511708 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
COPS4-210ENST00000511708 VEGFBP49765 207 aa16.79■□□□□ 0.28
COPS4-210ENST00000511708 RGS19P49795 217 aa16.79■□□□□ 0.28
COPS4-210ENST00000511708 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
COPS4-210ENST00000511708 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
COPS4-210ENST00000511708 SCN4AP35499 1836 aa16.77■□□□□ 0.27
COPS4-210ENST00000511708 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
COPS4-210ENST00000511708 ANKRD31Q8N7Z5 1873 aa16.76■□□□□ 0.27
COPS4-210ENST00000511708 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
COPS4-210ENST00000511708 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
COPS4-210ENST00000511708 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
COPS4-210ENST00000511708 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
COPS4-210ENST00000511708 PTCD1O75127 700 aaKnown RBP16.75■□□□□ 0.27
COPS4-210ENST00000511708 NFIXQ14938 502 aa16.75■□□□□ 0.27
COPS4-210ENST00000511708 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
COPS4-210ENST00000511708 PDE4DIPQ5VU43 2346 aa16.75■□□□□ 0.27
COPS4-210ENST00000511708 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
COPS4-210ENST00000511708 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
COPS4-210ENST00000511708 ZPR1O75312 459 aa16.73■□□□□ 0.27
COPS4-210ENST00000511708 CABP4P57796 275 aa16.73■□□□□ 0.27
COPS4-210ENST00000511708 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
COPS4-210ENST00000511708 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
COPS4-210ENST00000511708 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
COPS4-210ENST00000511708 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
COPS4-210ENST00000511708 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
COPS4-210ENST00000511708 DDNO94850 711 aaPredicted RBP16.72■□□□□ 0.27
COPS4-210ENST00000511708 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
COPS4-210ENST00000511708 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
COPS4-210ENST00000511708 CARD14Q9BXL6 1004 aa16.72■□□□□ 0.27
COPS4-210ENST00000511708 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
COPS4-210ENST00000511708 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
COPS4-210ENST00000511708 H0YIN7 160 aa16.71■□□□□ 0.27
COPS4-210ENST00000511708 SERPINB2P05120 415 aa16.71■□□□□ 0.27
COPS4-210ENST00000511708 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
COPS4-210ENST00000511708 BCL2L12Q9HB09 334 aa16.71■□□□□ 0.27
COPS4-210ENST00000511708 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
COPS4-210ENST00000511708 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
COPS4-210ENST00000511708 RASSF10A6NK89 507 aa16.7■□□□□ 0.26
COPS4-210ENST00000511708 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
COPS4-210ENST00000511708 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
COPS4-210ENST00000511708 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
COPS4-210ENST00000511708 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
COPS4-210ENST00000511708 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
COPS4-210ENST00000511708 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
COPS4-210ENST00000511708 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
COPS4-210ENST00000511708 CCDC85CA6NKD9 419 aa16.68■□□□□ 0.26
COPS4-210ENST00000511708 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
COPS4-210ENST00000511708 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
COPS4-210ENST00000511708 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
COPS4-210ENST00000511708 COL15A1P39059 1388 aa16.67■□□□□ 0.26
COPS4-210ENST00000511708 C21orf2O43822 256 aa16.67■□□□□ 0.26
COPS4-210ENST00000511708 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
COPS4-210ENST00000511708 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
COPS4-210ENST00000511708 MTHFSP49914 203 aa16.66■□□□□ 0.26
COPS4-210ENST00000511708 DEFB115Q30KQ5 88 aa16.66■□□□□ 0.26
COPS4-210ENST00000511708 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
COPS4-210ENST00000511708 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
COPS4-210ENST00000511708 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
COPS4-210ENST00000511708 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
COPS4-210ENST00000511708 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
COPS4-210ENST00000511708 ZNF622Q969S3 477 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■□□□ 12.1
COPS4-210ENST00000511708 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
COPS4-210ENST00000511708 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
COPS4-210ENST00000511708 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
COPS4-210ENST00000511708 PDE6BP35913 854 aa16.61■□□□□ 0.25
COPS4-210ENST00000511708 C1orf141Q5JVX7 400 aa16.61■□□□□ 0.25
COPS4-210ENST00000511708 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
COPS4-210ENST00000511708 LTBP1Q14766 1721 aa16.6■□□□□ 0.25
COPS4-210ENST00000511708 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
COPS4-210ENST00000511708 CASP8AP2Q9UKL3 1982 aa16.6■□□□□ 0.25
COPS4-210ENST00000511708 MRC1P22897 1456 aa16.6■□□□□ 0.25
COPS4-210ENST00000511708 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
COPS4-210ENST00000511708 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
COPS4-210ENST00000511708 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
COPS4-210ENST00000511708 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
COPS4-210ENST00000511708 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
COPS4-210ENST00000511708 HACL1Q9UJ83 578 aa16.59■□□□□ 0.25
COPS4-210ENST00000511708 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
COPS4-210ENST00000511708 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
COPS4-210ENST00000511708 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
COPS4-210ENST00000511708 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
COPS4-210ENST00000511708 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
COPS4-210ENST00000511708 EPHX2P34913 555 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 TBC1D9BQ66K14 1250 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
COPS4-210ENST00000511708 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 SLC52A2Q9HAB3 445 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
COPS4-210ENST00000511708 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
COPS4-210ENST00000511708 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
COPS4-210ENST00000511708 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
COPS4-210ENST00000511708 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
COPS4-210ENST00000511708 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms