RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 ZPR1O75312 459 aa30.98■■■□□ 2.55
SMAD5-207ENST00000511116 USPL1Q5W0Q7 1092 aa30.98■■■□□ 2.55
SMAD5-207ENST00000511116 NARFQ9UHQ1 456 aa30.98■■■□□ 2.55
SMAD5-207ENST00000511116 COL15A1P39059 1388 aa30.97■■■□□ 2.55
SMAD5-207ENST00000511116 AFDNP55196 1824 aaKnown RBP30.97■■■□□ 2.55
SMAD5-207ENST00000511116 C9orf131Q5VYM1 1079 aa30.97■■■□□ 2.55
SMAD5-207ENST00000511116 IFFO2Q5TF58 517 aa30.96■■■□□ 2.55
SMAD5-207ENST00000511116 NMRK2Q9NPI5 230 aa30.96■■■□□ 2.55
SMAD5-207ENST00000511116 ZBTB1Q9Y2K1 713 aa30.96■■■□□ 2.55
SMAD5-207ENST00000511116 CHRNA5P30532 468 aa30.95■■■□□ 2.55
SMAD5-207ENST00000511116 SBF1O95248 1867 aa30.94■■■□□ 2.54
SMAD5-207ENST00000511116 BCL2L12Q9HB09 334 aa30.94■■■□□ 2.54
SMAD5-207ENST00000511116 NFIXQ14938 502 aa30.93■■■□□ 2.54
SMAD5-207ENST00000511116 APLP1P51693 650 aa30.92■■■□□ 2.54
SMAD5-207ENST00000511116 DLEC1Q9Y238 1755 aa30.92■■■□□ 2.54
SMAD5-207ENST00000511116 CC2D1BQ5T0F9 858 aaKnown RBP30.91■■■□□ 2.54
SMAD5-207ENST00000511116 SIPA1L3O60292 1781 aaPredicted RBP30.89■■■□□ 2.54
SMAD5-207ENST00000511116 RBM46Q8TBY0 533 aaKnown RBP30.88■■■□□ 2.53
SMAD5-207ENST00000511116 EIF5P55010 431 aaKnown RBP30.87■■■□□ 2.53
SMAD5-207ENST00000511116 DNAJC5GQ8N7S2 189 aa30.87■■■□□ 2.53
SMAD5-207ENST00000511116 RNF181Q9P0P0 153 aa30.87■■■□□ 2.53
SMAD5-207ENST00000511116 SERPINB2P05120 415 aa30.85■■■□□ 2.53
SMAD5-207ENST00000511116 IL17REQ8NFR9 667 aa30.85■■■□□ 2.53
SMAD5-207ENST00000511116 KDM2BQ8NHM5 1336 aa30.84■■■□□ 2.53
SMAD5-207ENST00000511116 ZC3H4Q9UPT8 1303 aaKnown RBP30.84■■■□□ 2.53
SMAD5-207ENST00000511116 TNRC6CQ9HCJ0 1690 aaKnown RBP30.84■■■□□ 2.53
SMAD5-207ENST00000511116 HEG1Q9ULI3 1381 aa30.83■■■□□ 2.53
SMAD5-207ENST00000511116 STARD3NLO95772 234 aa30.83■■■□□ 2.53
SMAD5-207ENST00000511116 ZNF790Q6PG37 636 aa30.82■■■□□ 2.52
SMAD5-207ENST00000511116 TTC5Q8N0Z6 440 aa30.82■■■□□ 2.52
SMAD5-207ENST00000511116 GAS2L2Q8NHY3 880 aa30.82■■■□□ 2.52
SMAD5-207ENST00000511116 ZNF496Q96IT1 587 aaPredicted RBP30.82■■■□□ 2.52
SMAD5-207ENST00000511116 CEMIPQ8WUJ3 1361 aa30.81■■■□□ 2.52
SMAD5-207ENST00000511116 SCN7AQ01118 1682 aa30.81■■■□□ 2.52
SMAD5-207ENST00000511116 GNAT3A8MTJ3 354 aa30.81■■■□□ 2.52
SMAD5-207ENST00000511116 CANXP27824 592 aaKnown RBP30.81■■■□□ 2.52
SMAD5-207ENST00000511116 WDR90Q96KV7 1748 aa30.81■■■□□ 2.52
SMAD5-207ENST00000511116 CARMIL3Q8ND23 1372 aa30.8■■■□□ 2.52
SMAD5-207ENST00000511116 A0A087WZG4 1122 aa30.8■■■□□ 2.52
SMAD5-207ENST00000511116 FSTL1Q12841 308 aa30.8■■■□□ 2.52
SMAD5-207ENST00000511116 TEX13AQ9BXU3 409 aaPredicted RBP30.79■■■□□ 2.52
SMAD5-207ENST00000511116 TEFQ10587 303 aa30.78■■■□□ 2.52
SMAD5-207ENST00000511116 TTLL6Q8N841 843 aa30.78■■■□□ 2.52
SMAD5-207ENST00000511116 U2SURPO15042 1029 aaKnown RBP30.77■■■□□ 2.52
SMAD5-207ENST00000511116 PRELPP51888 382 aa30.77■■■□□ 2.52
SMAD5-207ENST00000511116 RASSF7Q02833 373 aa30.77■■■□□ 2.52
SMAD5-207ENST00000511116 ANKRD31Q8N7Z5 1873 aa30.77■■■□□ 2.52
SMAD5-207ENST00000511116 C16orf71Q8IYS4 520 aaPredicted RBP30.76■■■□□ 2.51
SMAD5-207ENST00000511116 LMNB1P20700 586 aa30.75■■■□□ 2.51
SMAD5-207ENST00000511116 IL6STP40189 918 aaPredicted RBP30.75■■■□□ 2.51
SMAD5-207ENST00000511116 C2CD5Q86YS7 1000 aa30.75■■■□□ 2.51
SMAD5-207ENST00000511116 TBC1D9BQ66K14 1250 aa30.74■■■□□ 2.51
SMAD5-207ENST00000511116 RRAGCQ9HB90 399 aa30.74■■■□□ 2.51
SMAD5-207ENST00000511116 H0YIN7 160 aa30.73■■■□□ 2.51
SMAD5-207ENST00000511116 FMNL2Q96PY5 1086 aa30.72■■■□□ 2.51
SMAD5-207ENST00000511116 RSPH6AQ9H0K4 717 aa30.72■■■□□ 2.51
SMAD5-207ENST00000511116 PDZRN3Q9UPQ7 1066 aa30.72■■■□□ 2.51
SMAD5-207ENST00000511116 NFKBIEO00221 500 aa30.71■■■□□ 2.51
SMAD5-207ENST00000511116 PHACTR3Q96KR7 559 aa30.71■■■□□ 2.51
SMAD5-207ENST00000511116 BICDL1Q6ZP65 573 aa30.7■■■□□ 2.51
SMAD5-207ENST00000511116 BRIP1Q9BX63 1249 aa30.7■■■□□ 2.51
SMAD5-207ENST00000511116 COL11A2P13942 1736 aaPredicted RBP30.7■■■□□ 2.5
SMAD5-207ENST00000511116 TIAM2Q8IVF5 1701 aa30.7■■■□□ 2.5
SMAD5-207ENST00000511116 GLTPD2A6NH11 291 aa30.69■■■□□ 2.5
SMAD5-207ENST00000511116 PRR5LQ6MZQ0 368 aa30.69■■■□□ 2.5
SMAD5-207ENST00000511116 CCDC88AQ3V6T2 1871 aa30.69■■■□□ 2.5
SMAD5-207ENST00000511116 BCORQ6W2J9 1755 aa30.69■■■□□ 2.5
SMAD5-207ENST00000511116 PRKAR2BP31323 418 aa30.68■■■□□ 2.5
SMAD5-207ENST00000511116 TBC1D2BQ9UPU7 963 aa30.68■■■□□ 2.5
SMAD5-207ENST00000511116 CAMTA2O94983 1202 aa30.67■■■□□ 2.5
SMAD5-207ENST00000511116 FER1L6Q2WGJ9 1857 aa30.66■■■□□ 2.5
SMAD5-207ENST00000511116 KCNQ3O43525 872 aa30.66■■■□□ 2.5
SMAD5-207ENST00000511116 A1BGP04217 495 aa30.66■■■□□ 2.5
SMAD5-207ENST00000511116 PDE6BP35913 854 aa30.66■■■□□ 2.5
SMAD5-207ENST00000511116 KLRG1Q96E93 195 aa30.66■■■□□ 2.5
SMAD5-207ENST00000511116 JMYQ8N9B5 988 aa30.65■■■□□ 2.5
SMAD5-207ENST00000511116 SMC1BQ8NDV3 1235 aa30.65■■■□□ 2.5
SMAD5-207ENST00000511116 BTBD11A6QL63 1104 aa30.64■■■□□ 2.5
SMAD5-207ENST00000511116 CFAP53Q96M91 514 aa30.64■■■□□ 2.5
SMAD5-207ENST00000511116 DICER1Q9UPY3 1922 aaKnown RBP30.63■■■□□ 2.49
SMAD5-207ENST00000511116 VEGFAP15692 232 aaPredicted RBP30.63■■■□□ 2.49
SMAD5-207ENST00000511116 HTRA3P83110 453 aa30.63■■■□□ 2.49
SMAD5-207ENST00000511116 CNGB1Q14028 1251 aaPredicted RBP30.63■■■□□ 2.49
SMAD5-207ENST00000511116 ZNF330Q9Y3S2 320 aaPredicted RBP30.61■■■□□ 2.49
SMAD5-207ENST00000511116 LTBP3Q9NS15 1303 aa30.61■■■□□ 2.49
SMAD5-207ENST00000511116 SETDB2Q96T68 719 aa30.6■■■□□ 2.49
SMAD5-207ENST00000511116 USP16Q9Y5T5 823 aa30.6■■■□□ 2.49
SMAD5-207ENST00000511116 PCNTO95613 3336 aa30.6■■■□□ 2.49
SMAD5-207ENST00000511116 ARFGEF2Q9Y6D5 1785 aa30.59■■■□□ 2.49
SMAD5-207ENST00000511116 CNBD1Q8NA66 436 aa30.59■■■□□ 2.49
SMAD5-207ENST00000511116 ZNF622Q969S3 477 aaKnown RBP eCLIP30.59■■■□□ 2.495e-6■□□□□ 10.2
SMAD5-207ENST00000511116 NUDCQ9Y266 331 aa30.59■■■□□ 2.49
SMAD5-207ENST00000511116 POTECB2RU33 542 aa30.58■■■□□ 2.49
SMAD5-207ENST00000511116 DZIP3Q86Y13 1208 aaKnown RBP30.58■■■□□ 2.49
SMAD5-207ENST00000511116 CCDC24Q8N4L8 307 aa30.58■■■□□ 2.49
SMAD5-207ENST00000511116 C21orf2O43822 256 aa30.57■■■□□ 2.48
SMAD5-207ENST00000511116 PPP2R1AP30153 589 aa30.57■■■□□ 2.48
SMAD5-207ENST00000511116 STYK1Q6J9G0 422 aa30.57■■■□□ 2.48
SMAD5-207ENST00000511116 CLEC4GQ6UXB4 293 aa30.57■■■□□ 2.48
SMAD5-207ENST00000511116 SLX4Q8IY92 1834 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms