RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 PARP3Q9Y6F1 533 aa29.28■■■□□ 2.28
SPOCK1-209ENST00000510689 NARFQ9UHQ1 456 aa29.27■■■□□ 2.28
SPOCK1-209ENST00000510689 WWC3Q9ULE0 1092 aa29.27■■■□□ 2.28
SPOCK1-209ENST00000510689 NRXN2Q9P2S2 1712 aa29.27■■■□□ 2.28
SPOCK1-209ENST00000510689 COL15A1P39059 1388 aa29.26■■■□□ 2.28
SPOCK1-209ENST00000510689 TTC5Q8N0Z6 440 aa29.26■■■□□ 2.27
SPOCK1-209ENST00000510689 BCL2L12Q9HB09 334 aa29.26■■■□□ 2.27
SPOCK1-209ENST00000510689 A0A0G2JLW4 131 aa29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 POLRMTO00411 1230 aaKnown RBP29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 KCNQ3O43525 872 aa29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 KCNA3P22001 575 aa29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 EIF5P55010 431 aaKnown RBP29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 USPL1Q5W0Q7 1092 aa29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 ADCY9O60503 1353 aa29.25■■■□□ 2.27
SPOCK1-209ENST00000510689 ARFGEF1Q9Y6D6 1849 aa29.24■■■□□ 2.27
SPOCK1-209ENST00000510689 DPEP1P16444 411 aa29.23■■■□□ 2.27
SPOCK1-209ENST00000510689 ZPR1O75312 459 aa29.22■■■□□ 2.27
SPOCK1-209ENST00000510689 STARD3NLO95772 234 aa29.22■■■□□ 2.27
SPOCK1-209ENST00000510689 TEX13AQ9BXU3 409 aaPredicted RBP29.21■■■□□ 2.27
SPOCK1-209ENST00000510689 HTATSF1O43719 755 aaKnown RBP29.2■■■□□ 2.26
SPOCK1-209ENST00000510689 MCM10Q7L590 875 aa29.2■■■□□ 2.26
SPOCK1-209ENST00000510689 FMNL2Q96PY5 1086 aa29.2■■■□□ 2.26
SPOCK1-209ENST00000510689 BTBD11A6QL63 1104 aa29.19■■■□□ 2.26
SPOCK1-209ENST00000510689 CANXP27824 592 aaKnown RBP29.19■■■□□ 2.26
SPOCK1-209ENST00000510689 NFIXQ14938 502 aa29.19■■■□□ 2.26
SPOCK1-209ENST00000510689 PLEKHF1Q96S99 279 aa29.19■■■□□ 2.26
SPOCK1-209ENST00000510689 SCN7AQ01118 1682 aa29.18■■■□□ 2.26
SPOCK1-209ENST00000510689 DCTN1Q14203 1278 aa29.17■■■□□ 2.26
SPOCK1-209ENST00000510689 ATP10DQ9P241 1426 aa29.17■■■□□ 2.26
SPOCK1-209ENST00000510689 A1BGP04217 495 aa29.14■■■□□ 2.26
SPOCK1-209ENST00000510689 IL6STP40189 918 aaPredicted RBP29.14■■■□□ 2.26
SPOCK1-209ENST00000510689 RTF1Q92541 710 aaKnown RBP29.14■■■□□ 2.26
SPOCK1-209ENST00000510689 BCS1LQ9Y276 419 aa29.14■■■□□ 2.26
SPOCK1-209ENST00000510689 USP16Q9Y5T5 823 aa29.14■■■□□ 2.26
SPOCK1-209ENST00000510689 DLEC1Q9Y238 1755 aa29.13■■■□□ 2.25
SPOCK1-209ENST00000510689 BCORQ6W2J9 1755 aa29.12■■■□□ 2.25
SPOCK1-209ENST00000510689 KDM3BQ7LBC6 1761 aa29.12■■■□□ 2.25
SPOCK1-209ENST00000510689 A0A087WZG4 1122 aa29.12■■■□□ 2.25
SPOCK1-209ENST00000510689 PRAMEF22A3QJZ6 481 aa29.11■■■□□ 2.25
SPOCK1-209ENST00000510689 C1QTNF8P60827 252 aa29.11■■■□□ 2.25
SPOCK1-209ENST00000510689 ANKRD31Q8N7Z5 1873 aa29.1■■■□□ 2.25
SPOCK1-209ENST00000510689 CHRNA5P30532 468 aa29.1■■■□□ 2.25
SPOCK1-209ENST00000510689 RALBP1Q15311 655 aa29.1■■■□□ 2.25
SPOCK1-209ENST00000510689 PIM2Q9P1W9 311 aa29.1■■■□□ 2.25
SPOCK1-209ENST00000510689 SBF1O95248 1867 aa29.09■■■□□ 2.25
SPOCK1-209ENST00000510689 SERPINB2P05120 415 aa29.09■■■□□ 2.25
SPOCK1-209ENST00000510689 TAF7Q15545 349 aaPredicted RBP29.09■■■□□ 2.25
SPOCK1-209ENST00000510689 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
SPOCK1-209ENST00000510689 TBC1D2BQ9UPU7 963 aa29.08■■■□□ 2.25
SPOCK1-209ENST00000510689 SNRPA1P09661 255 aaKnown RBP29.07■■■□□ 2.24
SPOCK1-209ENST00000510689 GIGYF1O75420 1035 aaPredicted RBP29.06■■■□□ 2.24
SPOCK1-209ENST00000510689 CAMTA2O94983 1202 aa29.06■■■□□ 2.24
SPOCK1-209ENST00000510689 NFE2L2Q16236 605 aa29.06■■■□□ 2.24
SPOCK1-209ENST00000510689 TBC1D9BQ66K14 1250 aa29.06■■■□□ 2.24
SPOCK1-209ENST00000510689 CARMIL3Q8ND23 1372 aa29.05■■■□□ 2.24
SPOCK1-209ENST00000510689 LAMB4A4D0S4 1761 aa29.05■■■□□ 2.24
SPOCK1-209ENST00000510689 NBPF26B4DH59 902 aa29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 DALRD3Q5D0E6 543 aaKnown RBP29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 NBPF10Q6P3W6 841 aaKnown RBP29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 ARHGAP27Q6ZUM4 889 aa29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 NBPF15Q8N660 670 aa29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 MIS18AQ9NYP9 233 aa29.03■■■□□ 2.24
SPOCK1-209ENST00000510689 PIP4K2AP48426 406 aaPredicted RBP29.02■■■□□ 2.24
SPOCK1-209ENST00000510689 BICDL1Q6ZP65 573 aa29.01■■■□□ 2.23
SPOCK1-209ENST00000510689 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
SPOCK1-209ENST00000510689 ZNF330Q9Y3S2 320 aaPredicted RBP29■■■□□ 2.23
SPOCK1-209ENST00000510689 NEFMP07197 916 aa28.99■■■□□ 2.23
SPOCK1-209ENST00000510689 DZIP3Q86Y13 1208 aaKnown RBP28.99■■■□□ 2.23
SPOCK1-209ENST00000510689 THUMPD2Q9BTF0 503 aaKnown RBP28.99■■■□□ 2.23
SPOCK1-209ENST00000510689 PNNQ9H307 717 aaKnown RBP28.99■■■□□ 2.23
SPOCK1-209ENST00000510689 COL11A2P13942 1736 aaPredicted RBP28.98■■■□□ 2.23
SPOCK1-209ENST00000510689 MYBBP1AQ9BQG0 1328 aaKnown RBP28.97■■■□□ 2.23
SPOCK1-209ENST00000510689 PRR5LQ6MZQ0 368 aa28.97■■■□□ 2.23
SPOCK1-209ENST00000510689 PNISRQ8TF01 805 aaKnown RBP28.97■■■□□ 2.23
SPOCK1-209ENST00000510689 EIF4A1P60842 406 aaKnown RBP28.96■■■□□ 2.23
SPOCK1-209ENST00000510689 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.22
SPOCK1-209ENST00000510689 ZNF526Q8TF50 670 aaPredicted RBP28.95■■■□□ 2.22
SPOCK1-209ENST00000510689 CCDC88AQ3V6T2 1871 aa28.95■■■□□ 2.22
SPOCK1-209ENST00000510689 RGL2O15211 777 aa28.94■■■□□ 2.22
SPOCK1-209ENST00000510689 BRIP1Q9BX63 1249 aa28.94■■■□□ 2.22
SPOCK1-209ENST00000510689 CEP350Q5VT06 3117 aa28.94■■■□□ 2.22
SPOCK1-209ENST00000510689 MAPK8IP3Q9UPT6 1336 aa28.94■■■□□ 2.22
SPOCK1-209ENST00000510689 KIF3CO14782 793 aa28.93■■■□□ 2.22
SPOCK1-209ENST00000510689 C2CD5Q86YS7 1000 aa28.93■■■□□ 2.22
SPOCK1-209ENST00000510689 SETDB2Q96T68 719 aa28.93■■■□□ 2.22
SPOCK1-209ENST00000510689 C9orf131Q5VYM1 1079 aa28.92■■■□□ 2.22
SPOCK1-209ENST00000510689 NUP98P52948 1817 aa28.92■■■□□ 2.22
SPOCK1-209ENST00000510689 H0YIN7 160 aa28.91■■■□□ 2.22
SPOCK1-209ENST00000510689 NPM2Q86SE8 214 aaKnown RBP28.91■■■□□ 2.22
SPOCK1-209ENST00000510689 CCDC24Q8N4L8 307 aa28.91■■■□□ 2.22
SPOCK1-209ENST00000510689 TTLL6Q8N841 843 aa28.91■■■□□ 2.22
SPOCK1-209ENST00000510689 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
SPOCK1-209ENST00000510689 RIPK4P57078 832 aa28.89■■■□□ 2.22
SPOCK1-209ENST00000510689 PDZRN3Q9UPQ7 1066 aa28.89■■■□□ 2.22
SPOCK1-209ENST00000510689 FER1L6Q2WGJ9 1857 aa28.89■■■□□ 2.21
SPOCK1-209ENST00000510689 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
SPOCK1-209ENST00000510689 SLX4Q8IY92 1834 aa28.88■■■□□ 2.21
SPOCK1-209ENST00000510689 PRELPP51888 382 aa28.88■■■□□ 2.21
SPOCK1-209ENST00000510689 SENP3-EIF4A1A0A087X0R7 540 aa28.87■■■□□ 2.21
SPOCK1-209ENST00000510689 PDE6BP35913 854 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms