RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 STAP2Q9UGK3 403 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 AOX1Q06278 1338 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 TSHZ3Q63HK5 1081 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 ABCC6O95255 1503 aa20.35■□□□□ 0.85
CLMAT3-201ENST00000510576 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
CLMAT3-201ENST00000510576 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
CLMAT3-201ENST00000510576 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
CLMAT3-201ENST00000510576 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.85
CLMAT3-201ENST00000510576 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.84
CLMAT3-201ENST00000510576 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.84
CLMAT3-201ENST00000510576 TATP17735 454 aaPredicted RBP20.33■□□□□ 0.84
CLMAT3-201ENST00000510576 CADPS2Q86UW7 1296 aa20.33■□□□□ 0.84
CLMAT3-201ENST00000510576 SRGAP3O43295 1099 aa20.32■□□□□ 0.84
CLMAT3-201ENST00000510576 DDX11L8A8MPP1 907 aa20.32■□□□□ 0.84
CLMAT3-201ENST00000510576 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
CLMAT3-201ENST00000510576 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
CLMAT3-201ENST00000510576 C5P01031 1676 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 IL1RAPL2Q9NP60 686 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 MAP3K2Q9Y2U5 619 aa20.31■□□□□ 0.84
CLMAT3-201ENST00000510576 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 MEGF6O75095 1541 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 HSP90AB4PQ58FF6 505 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 KIF1BPQ96EK5 621 aa20.3■□□□□ 0.84
CLMAT3-201ENST00000510576 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
CLMAT3-201ENST00000510576 ST18O60284 1047 aa20.29■□□□□ 0.84
CLMAT3-201ENST00000510576 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
CLMAT3-201ENST00000510576 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
CLMAT3-201ENST00000510576 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
CLMAT3-201ENST00000510576 PHKG2P15735 406 aa20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 GBP4Q96PP9 640 aa20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 SLC52A2Q9HAB3 445 aa20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 HDAC5Q9UQL6 1122 aa20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 XIRP1Q702N8 1843 aaKnown RBP20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 CHMLP26374 656 aa20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 DDX21Q9NR30 783 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
CLMAT3-201ENST00000510576 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.84
CLMAT3-201ENST00000510576 CABLES1Q8TDN4 633 aa20.27■□□□□ 0.84
CLMAT3-201ENST00000510576 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.83
CLMAT3-201ENST00000510576 MTX1Q13505 466 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 TRAK2O60296 914 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 MCCP23508 829 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 SPATA31A3Q5VYP0 1347 aa20.26■□□□□ 0.83
CLMAT3-201ENST00000510576 MRC1P22897 1456 aa20.25■□□□□ 0.83
CLMAT3-201ENST00000510576 CHRNA2Q15822 529 aa20.25■□□□□ 0.83
CLMAT3-201ENST00000510576 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
CLMAT3-201ENST00000510576 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
CLMAT3-201ENST00000510576 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
CLMAT3-201ENST00000510576 CPDO75976 1380 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 PTMSP20962 102 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 PDIA6Q15084 440 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 CWF19L2Q2TBE0 894 aaKnown RBP20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 PI4K2BQ8TCG2 481 aa20.23■□□□□ 0.83
CLMAT3-201ENST00000510576 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
CLMAT3-201ENST00000510576 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
CLMAT3-201ENST00000510576 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
CLMAT3-201ENST00000510576 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
CLMAT3-201ENST00000510576 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
CLMAT3-201ENST00000510576 GRM8O00222 908 aa20.21■□□□□ 0.83
CLMAT3-201ENST00000510576 UTYO14607 1347 aa20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 SSFA2P28290 1259 aa20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 ANAPC15P60006 121 aa20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
CLMAT3-201ENST00000510576 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 CNTROBQ8N137 903 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 LAMB4A4D0S4 1761 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 NUCB2P80303 420 aa20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 CLASRPQ8N2M8 674 aaKnown RBP20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
CLMAT3-201ENST00000510576 CYP27B1O15528 508 aa20.18■□□□□ 0.82
CLMAT3-201ENST00000510576 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
CLMAT3-201ENST00000510576 MYL6BP14649 208 aa20.18■□□□□ 0.82
CLMAT3-201ENST00000510576 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
CLMAT3-201ENST00000510576 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms