RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 ZPR1O75312 459 aa30.56■■■□□ 2.48
SNF8-209ENST00000510558 STARD3NLO95772 234 aa30.56■■■□□ 2.48
SNF8-209ENST00000510558 RALBP1Q15311 655 aa30.56■■■□□ 2.48
SNF8-209ENST00000510558 MCM10Q7L590 875 aa30.56■■■□□ 2.48
SNF8-209ENST00000510558 PXDNLA1KZ92 1463 aa30.56■■■□□ 2.48
SNF8-209ENST00000510558 USPL1Q5W0Q7 1092 aa30.55■■■□□ 2.48
SNF8-209ENST00000510558 FMNL2Q96PY5 1086 aa30.55■■■□□ 2.48
SNF8-209ENST00000510558 WWC3Q9ULE0 1092 aa30.55■■■□□ 2.48
SNF8-209ENST00000510558 HTATSF1O43719 755 aaKnown RBP30.54■■■□□ 2.48
SNF8-209ENST00000510558 TEX13AQ9BXU3 409 aaPredicted RBP30.54■■■□□ 2.48
SNF8-209ENST00000510558 KCNQ3O43525 872 aa30.53■■■□□ 2.48
SNF8-209ENST00000510558 NEFMP07197 916 aa30.53■■■□□ 2.48
SNF8-209ENST00000510558 CANXP27824 592 aaKnown RBP30.53■■■□□ 2.48
SNF8-209ENST00000510558 DCTN1Q14203 1278 aa30.53■■■□□ 2.48
SNF8-209ENST00000510558 TGFB2P61812 414 aa30.52■■■□□ 2.48
SNF8-209ENST00000510558 DDR1Q08345 913 aa30.52■■■□□ 2.48
SNF8-209ENST00000510558 NARFQ9UHQ1 456 aa30.52■■■□□ 2.48
SNF8-209ENST00000510558 PLEKHF1Q96S99 279 aa30.5■■■□□ 2.47
SNF8-209ENST00000510558 TM4SF1P30408 202 aa30.49■■■□□ 2.47
SNF8-209ENST00000510558 BRCA1P38398 1863 aaKnown RBP30.48■■■□□ 2.47
SNF8-209ENST00000510558 EIF5P55010 431 aaKnown RBP30.48■■■□□ 2.47
SNF8-209ENST00000510558 AFDNP55196 1824 aaKnown RBP30.47■■■□□ 2.47
SNF8-209ENST00000510558 A0A0G2JLW4 131 aa30.47■■■□□ 2.47
SNF8-209ENST00000510558 POLRMTO00411 1230 aaKnown RBP30.47■■■□□ 2.47
SNF8-209ENST00000510558 SCN7AQ01118 1682 aa30.46■■■□□ 2.47
SNF8-209ENST00000510558 A0A087WZG4 1122 aa30.45■■■□□ 2.47
SNF8-209ENST00000510558 PNNQ9H307 717 aaKnown RBP30.45■■■□□ 2.47
SNF8-209ENST00000510558 BCL2L12Q9HB09 334 aa30.45■■■□□ 2.47
SNF8-209ENST00000510558 MYBBP1AQ9BQG0 1328 aaKnown RBP30.45■■■□□ 2.46
SNF8-209ENST00000510558 DPEP1P16444 411 aa30.44■■■□□ 2.46
SNF8-209ENST00000510558 NFIXQ14938 502 aa30.44■■■□□ 2.46
SNF8-209ENST00000510558 NFE2L2Q16236 605 aa30.44■■■□□ 2.46
SNF8-209ENST00000510558 NRXN2Q9P2S2 1712 aa30.44■■■□□ 2.46
SNF8-209ENST00000510558 MAPK8IP3Q9UPT6 1336 aa30.44■■■□□ 2.46
SNF8-209ENST00000510558 A1BGP04217 495 aa30.43■■■□□ 2.46
SNF8-209ENST00000510558 TAF7Q15545 349 aaPredicted RBP30.43■■■□□ 2.46
SNF8-209ENST00000510558 ZNF330Q9Y3S2 320 aaPredicted RBP30.43■■■□□ 2.46
SNF8-209ENST00000510558 IL6STP40189 918 aaPredicted RBP30.42■■■□□ 2.46
SNF8-209ENST00000510558 BCS1LQ9Y276 419 aa30.41■■■□□ 2.46
SNF8-209ENST00000510558 USP16Q9Y5T5 823 aa30.41■■■□□ 2.46
SNF8-209ENST00000510558 KDM3BQ7LBC6 1761 aa30.41■■■□□ 2.46
SNF8-209ENST00000510558 PRAMEF22A3QJZ6 481 aa30.4■■■□□ 2.46
SNF8-209ENST00000510558 SNRPA1P09661 255 aaKnown RBP30.4■■■□□ 2.46
SNF8-209ENST00000510558 ARFGEF1Q9Y6D6 1849 aa30.38■■■□□ 2.45
SNF8-209ENST00000510558 KCNA3P22001 575 aa30.38■■■□□ 2.45
SNF8-209ENST00000510558 TBC1D2BQ9UPU7 963 aa30.38■■■□□ 2.45
SNF8-209ENST00000510558 BCORQ6W2J9 1755 aa30.38■■■□□ 2.45
SNF8-209ENST00000510558 LAMB4A4D0S4 1761 aa30.37■■■□□ 2.45
SNF8-209ENST00000510558 NPM2Q86SE8 214 aaKnown RBP30.37■■■□□ 2.45
SNF8-209ENST00000510558 MIS18AQ9NYP9 233 aa30.37■■■□□ 2.45
SNF8-209ENST00000510558 THUMPD2Q9BTF0 503 aaKnown RBP30.36■■■□□ 2.45
SNF8-209ENST00000510558 SERPINB2P05120 415 aa30.35■■■□□ 2.45
SNF8-209ENST00000510558 PIP4K2AP48426 406 aaPredicted RBP30.34■■■□□ 2.45
SNF8-209ENST00000510558 BICDL1Q6ZP65 573 aa30.34■■■□□ 2.45
SNF8-209ENST00000510558 PNISRQ8TF01 805 aaKnown RBP30.34■■■□□ 2.45
SNF8-209ENST00000510558 PIM2Q9P1W9 311 aa30.34■■■□□ 2.45
SNF8-209ENST00000510558 ATP10DQ9P241 1426 aa30.33■■■□□ 2.45
SNF8-209ENST00000510558 ADCY9O60503 1353 aa30.33■■■□□ 2.45
SNF8-209ENST00000510558 CHRNA5P30532 468 aa30.33■■■□□ 2.45
SNF8-209ENST00000510558 TBC1D9BQ66K14 1250 aa30.33■■■□□ 2.45
SNF8-209ENST00000510558 DLEC1Q9Y238 1755 aa30.31■■■□□ 2.44
SNF8-209ENST00000510558 CAMTA2O94983 1202 aa30.31■■■□□ 2.44
SNF8-209ENST00000510558 DZIP3Q86Y13 1208 aaKnown RBP30.31■■■□□ 2.44
SNF8-209ENST00000510558 PRKRIP1Q9H875 184 aaPredicted RBP30.29■■■□□ 2.44
SNF8-209ENST00000510558 CARMIL3Q8ND23 1372 aa30.28■■■□□ 2.44
SNF8-209ENST00000510558 ZEB1P37275 1124 aaPredicted RBP30.28■■■□□ 2.44
SNF8-209ENST00000510558 RIPK4P57078 832 aa30.28■■■□□ 2.44
SNF8-209ENST00000510558 DALRD3Q5D0E6 543 aaKnown RBP30.28■■■□□ 2.44
SNF8-209ENST00000510558 ANKRD31Q8N7Z5 1873 aa30.27■■■□□ 2.44
SNF8-209ENST00000510558 NBPF26B4DH59 902 aa30.27■■■□□ 2.44
SNF8-209ENST00000510558 TMPOP42166 694 aaKnown RBP30.27■■■□□ 2.44
SNF8-209ENST00000510558 NBPF10Q6P3W6 841 aaKnown RBP30.27■■■□□ 2.44
SNF8-209ENST00000510558 ARHGAP27Q6ZUM4 889 aa30.27■■■□□ 2.44
SNF8-209ENST00000510558 NBPF15Q8N660 670 aa30.27■■■□□ 2.44
SNF8-209ENST00000510558 EIF4A1P60842 406 aaKnown RBP30.26■■■□□ 2.43
SNF8-209ENST00000510558 WDR43Q15061 677 aaKnown RBP eCLIP30.26■■■□□ 2.43
SNF8-209ENST00000510558 CCDC146Q8IYE0 955 aa30.25■■■□□ 2.43
SNF8-209ENST00000510558 GIGYF1O75420 1035 aaPredicted RBP30.24■■■□□ 2.43
SNF8-209ENST00000510558 LMOD3Q0VAK6 560 aa30.23■■■□□ 2.43
SNF8-209ENST00000510558 SETDB2Q96T68 719 aa30.23■■■□□ 2.43
SNF8-209ENST00000510558 PRR5LQ6MZQ0 368 aa30.22■■■□□ 2.43
SNF8-209ENST00000510558 CLEC4GQ6UXB4 293 aa30.21■■■□□ 2.43
SNF8-209ENST00000510558 C2CD5Q86YS7 1000 aa30.21■■■□□ 2.43
SNF8-209ENST00000510558 RUNDC1Q96C34 613 aa30.21■■■□□ 2.43
SNF8-209ENST00000510558 TSPYL4Q9UJ04 414 aa30.21■■■□□ 2.43
SNF8-209ENST00000510558 RRP7AQ9Y3A4 280 aaKnown RBP30.21■■■□□ 2.43
SNF8-209ENST00000510558 C1QTNF8P60827 252 aa30.2■■■□□ 2.43
SNF8-209ENST00000510558 GPBP1L1Q9HC44 474 aaPredicted RBP30.2■■■□□ 2.43
SNF8-209ENST00000510558 ZNF652Q9Y2D9 606 aa30.2■■■□□ 2.43
SNF8-209ENST00000510558 COL11A2P13942 1736 aaPredicted RBP30.19■■■□□ 2.42
SNF8-209ENST00000510558 ZNF526Q8TF50 670 aaPredicted RBP30.19■■■□□ 2.42
SNF8-209ENST00000510558 ADAMTS8Q9UP79 889 aa30.19■■■□□ 2.42
SNF8-209ENST00000510558 H0YIN7 160 aa30.18■■■□□ 2.42
SNF8-209ENST00000510558 NEUROD2Q15784 382 aa30.18■■■□□ 2.42
SNF8-209ENST00000510558 CCDC24Q8N4L8 307 aa30.18■■■□□ 2.42
SNF8-209ENST00000510558 CNBD1Q8NA66 436 aa30.18■■■□□ 2.42
SNF8-209ENST00000510558 BRIP1Q9BX63 1249 aa30.18■■■□□ 2.42
SNF8-209ENST00000510558 SBF1O95248 1867 aa30.16■■■□□ 2.42
SNF8-209ENST00000510558 RGL2O15211 777 aa30.16■■■□□ 2.42
SNF8-209ENST00000510558 NPHP1O15259 732 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms