RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 CTCFLQ8NI51 663 aaPredicted RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 LUZP1Q86V48 1076 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 ZNF213O14771 459 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 USO1O60763 962 aaKnown RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 ADCY5O95622 1261 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 STX1AQ16623 288 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 STX6O43752 255 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 YEATS4O95619 227 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
NEK1-206ENST00000510533 GJB2P29033 226 aa12.29□□□□□ -0.44
NEK1-206ENST00000510533 PTPRCP08575 1304 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 PAFAH1B1P43034 410 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 EVI5LQ96CN4 794 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
NEK1-206ENST00000510533 MAP3K12Q12852 859 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 GOLGA8BA8MQT2 603 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 MPHOSPH10O00566 681 aaKnown RBP12.28□□□□□ -0.44
NEK1-206ENST00000510533 ZC3H6P61129 1189 aaKnown RBP12.28□□□□□ -0.44
NEK1-206ENST00000510533 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 CAVIN4Q5BKX8 364 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 BICDL1Q6ZP65 573 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 CCDC113Q9H0I3 377 aa12.28□□□□□ -0.44
NEK1-206ENST00000510533 POTEB2H3BUK9 544 aa12.27□□□□□ -0.44
NEK1-206ENST00000510533 TMC6Q7Z403 805 aa12.27□□□□□ -0.44
NEK1-206ENST00000510533 CPLX3Q8WVH0 158 aa12.27□□□□□ -0.44
NEK1-206ENST00000510533 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 CCDC91Q7Z6B0 441 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 RAB34Q9BZG1 259 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 CALCOCO1Q9P1Z2 691 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 POLR3GO15318 223 aaPredicted RBP12.27□□□□□ -0.45
NEK1-206ENST00000510533 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
NEK1-206ENST00000510533 KLHL40Q2TBA0 621 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 TBC1D32Q96NH3 1257 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 CCDC178Q5BJE1 867 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 IQCA1Q86XH1 822 aa12.27□□□□□ -0.45
NEK1-206ENST00000510533 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
NEK1-206ENST00000510533 IFFO1Q0D2I5 559 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 GIMAP7Q8NHV1 300 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
NEK1-206ENST00000510533 RNF41Q9H4P4 317 aaPredicted RBP12.26□□□□□ -0.45
NEK1-206ENST00000510533 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
NEK1-206ENST00000510533 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
NEK1-206ENST00000510533 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 UBE2HP62256 183 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 GOLGA6L9A6NEM1 432 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 TNIP1Q15025 636 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 TMEM266Q2M3C6 531 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 NME9Q86XW9 330 aa12.26□□□□□ -0.45
NEK1-206ENST00000510533 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 RAPGEF3O95398 923 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 CAVIN2O95810 425 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 ZNF165P49910 485 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 PTCD1O75127 700 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 NEBLO76041 1014 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 KIF20AO95235 890 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 FLIIQ13045 1269 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 BIN1O00499 593 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 SNW1Q13573 536 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 TDRD12Q587J7 1177 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 TTC22Q5TAA0 569 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 TMX1Q9H3N1 280 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
NEK1-206ENST00000510533 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
NEK1-206ENST00000510533 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 NLRP5P59047 1200 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 MICALCLQ6ZW33 695 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 DNA2P51530 1060 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 TMOD2Q9NZR1 351 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 SLC5A1P13866 664 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 ALS2CR12Q96Q35 445 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 IGHDP01880 384 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms