RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 NMRK2Q9NPI5 230 aa20■□□□□ 0.79
SMAD5-206ENST00000509962 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
SMAD5-206ENST00000509962 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
SMAD5-206ENST00000509962 CANXP27824 592 aaKnown RBP19.99■□□□□ 0.79
SMAD5-206ENST00000509962 APLP1P51693 650 aa19.99■□□□□ 0.79
SMAD5-206ENST00000509962 NFIXQ14938 502 aa19.99■□□□□ 0.79
SMAD5-206ENST00000509962 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
SMAD5-206ENST00000509962 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
SMAD5-206ENST00000509962 MRC1P22897 1456 aa19.99■□□□□ 0.79
SMAD5-206ENST00000509962 COL15A1P39059 1388 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 SERPINB2P05120 415 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 TEFQ10587 303 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 RNF181Q9P0P0 153 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 CEP350Q5VT06 3117 aa19.98■□□□□ 0.79
SMAD5-206ENST00000509962 GAS2L2Q8NHY3 880 aa19.97■□□□□ 0.79
SMAD5-206ENST00000509962 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
SMAD5-206ENST00000509962 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
SMAD5-206ENST00000509962 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
SMAD5-206ENST00000509962 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
SMAD5-206ENST00000509962 A0A087WZG4 1122 aa19.96■□□□□ 0.79
SMAD5-206ENST00000509962 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
SMAD5-206ENST00000509962 BICDL1Q6ZP65 573 aa19.95■□□□□ 0.78
SMAD5-206ENST00000509962 IL17REQ8NFR9 667 aa19.95■□□□□ 0.78
SMAD5-206ENST00000509962 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
SMAD5-206ENST00000509962 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
SMAD5-206ENST00000509962 EIF5P55010 431 aaKnown RBP19.94■□□□□ 0.78
SMAD5-206ENST00000509962 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
SMAD5-206ENST00000509962 RBM46Q8TBY0 533 aaKnown RBP19.94■□□□□ 0.78
SMAD5-206ENST00000509962 ZNF496Q96IT1 587 aaPredicted RBP19.94■□□□□ 0.78
SMAD5-206ENST00000509962 H0YIN7 160 aa19.93■□□□□ 0.78
SMAD5-206ENST00000509962 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
SMAD5-206ENST00000509962 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
SMAD5-206ENST00000509962 RRAGCQ9HB90 399 aa19.93■□□□□ 0.78
SMAD5-206ENST00000509962 C2CD5Q86YS7 1000 aa19.92■□□□□ 0.78
SMAD5-206ENST00000509962 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
SMAD5-206ENST00000509962 ZNF330Q9Y3S2 320 aaPredicted RBP19.92■□□□□ 0.78
SMAD5-206ENST00000509962 AFDNP55196 1824 aaKnown RBP19.92■□□□□ 0.78
SMAD5-206ENST00000509962 FMNL2Q96PY5 1086 aa19.9■□□□□ 0.78
SMAD5-206ENST00000509962 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
SMAD5-206ENST00000509962 HEG1Q9ULI3 1381 aa19.9■□□□□ 0.78
SMAD5-206ENST00000509962 SBF1O95248 1867 aa19.9■□□□□ 0.78
SMAD5-206ENST00000509962 LMNB1P20700 586 aa19.89■□□□□ 0.77
SMAD5-206ENST00000509962 FSTL1Q12841 308 aa19.89■□□□□ 0.77
SMAD5-206ENST00000509962 UBR2Q8IWV8 1755 aa19.89■□□□□ 0.77
SMAD5-206ENST00000509962 DNAJC5GQ8N7S2 189 aa19.89■□□□□ 0.77
SMAD5-206ENST00000509962 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
SMAD5-206ENST00000509962 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
SMAD5-206ENST00000509962 BTBD11A6QL63 1104 aa19.88■□□□□ 0.77
SMAD5-206ENST00000509962 IL6STP40189 918 aaPredicted RBP19.88■□□□□ 0.77
SMAD5-206ENST00000509962 RASSF7Q02833 373 aa19.88■□□□□ 0.77
SMAD5-206ENST00000509962 TBC1D9BQ66K14 1250 aa19.88■□□□□ 0.77
SMAD5-206ENST00000509962 PHACTR3Q96KR7 559 aa19.88■□□□□ 0.77
SMAD5-206ENST00000509962 NRXN2Q9P2S2 1712 aa19.88■□□□□ 0.77
SMAD5-206ENST00000509962 PRKAR2BP31323 418 aa19.87■□□□□ 0.77
SMAD5-206ENST00000509962 PDE6BP35913 854 aa19.87■□□□□ 0.77
SMAD5-206ENST00000509962 ZNF622Q969S3 477 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMAD5-206ENST00000509962 PDZRN3Q9UPQ7 1066 aa19.87■□□□□ 0.77
SMAD5-206ENST00000509962 ZC3H4Q9UPT8 1303 aaKnown RBP19.86■□□□□ 0.77
SMAD5-206ENST00000509962 A1BGP04217 495 aa19.86■□□□□ 0.77
SMAD5-206ENST00000509962 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
SMAD5-206ENST00000509962 BRIP1Q9BX63 1249 aa19.86■□□□□ 0.77
SMAD5-206ENST00000509962 NPHP1O15259 732 aa19.85■□□□□ 0.77
SMAD5-206ENST00000509962 RSPH6AQ9H0K4 717 aa19.85■□□□□ 0.77
SMAD5-206ENST00000509962 GLTPD2A6NH11 291 aa19.84■□□□□ 0.77
SMAD5-206ENST00000509962 KCNQ3O43525 872 aa19.84■□□□□ 0.77
SMAD5-206ENST00000509962 U2AF1L5P0DN76 240 aaPredicted RBP19.84■□□□□ 0.77
SMAD5-206ENST00000509962 U2AF1Q01081 240 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMAD5-206ENST00000509962 RTF1Q92541 710 aaKnown RBP19.84■□□□□ 0.77
SMAD5-206ENST00000509962 CARMIL3Q8ND23 1372 aa19.83■□□□□ 0.77
SMAD5-206ENST00000509962 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.77
SMAD5-206ENST00000509962 VEGFAP15692 232 aaPredicted RBP19.83■□□□□ 0.77
SMAD5-206ENST00000509962 PRR5LQ6MZQ0 368 aa19.83■□□□□ 0.77
SMAD5-206ENST00000509962 CCDC24Q8N4L8 307 aa19.83■□□□□ 0.77
SMAD5-206ENST00000509962 SMC1BQ8NDV3 1235 aa19.83■□□□□ 0.77
SMAD5-206ENST00000509962 PRELPP51888 382 aa19.82■□□□□ 0.76
SMAD5-206ENST00000509962 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
SMAD5-206ENST00000509962 ZNF219Q9P2Y4 722 aaPredicted RBP19.82■□□□□ 0.76
SMAD5-206ENST00000509962 USP16Q9Y5T5 823 aa19.82■□□□□ 0.76
SMAD5-206ENST00000509962 SIPA1L3O60292 1781 aaPredicted RBP19.82■□□□□ 0.76
SMAD5-206ENST00000509962 DLEC1Q9Y238 1755 aa19.82■□□□□ 0.76
SMAD5-206ENST00000509962 C21orf2O43822 256 aa19.81■□□□□ 0.76
SMAD5-206ENST00000509962 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
SMAD5-206ENST00000509962 DZIP3Q86Y13 1208 aaKnown RBP19.81■□□□□ 0.76
SMAD5-206ENST00000509962 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
SMAD5-206ENST00000509962 CCDC88AQ3V6T2 1871 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 NFKBIEO00221 500 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 PPP2R1AP30153 589 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 ST5P78524 1137 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 HTRA3P83110 453 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 CNBD1Q8NA66 436 aa19.8■□□□□ 0.76
SMAD5-206ENST00000509962 SNRPA1P09661 255 aaKnown RBP19.79■□□□□ 0.76
SMAD5-206ENST00000509962 MCM10Q7L590 875 aa19.79■□□□□ 0.76
SMAD5-206ENST00000509962 CNKSR1Q969H4 720 aa19.79■□□□□ 0.76
SMAD5-206ENST00000509962 KLRG1Q96E93 195 aa19.79■□□□□ 0.76
SMAD5-206ENST00000509962 PIP4K2AP48426 406 aaPredicted RBP19.78■□□□□ 0.76
SMAD5-206ENST00000509962 WDR90Q96KV7 1748 aa19.78■□□□□ 0.76
SMAD5-206ENST00000509962 HTATSF1O43719 755 aaKnown RBP19.77■□□□□ 0.76
SMAD5-206ENST00000509962 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
SMAD5-206ENST00000509962 CLEC4GQ6UXB4 293 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms