RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 NRXN2Q9P2S2 1712 aa6.96□□□□□ -1.29
HTT-206ENST00000509618 RASSF10A6NK89 507 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 TMEM88BA6NKF7 163 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 PHKG2P15735 406 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 TM4SF1P30408 202 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 RFC4P35249 363 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 CRKLP46109 303 aaKnown RBP6.96□□□□□ -1.3
HTT-206ENST00000509618 SOX10P56693 466 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 NFIXQ14938 502 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 HDGFL2Q7Z4V5 671 aaPredicted RBP6.96□□□□□ -1.3
HTT-206ENST00000509618 SLC51AQ86UW1 340 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 RBM42Q9BTD8 480 aaKnown RBP6.96□□□□□ -1.3
HTT-206ENST00000509618 BCL2L12Q9HB09 334 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 RNF216Q9NWF9 866 aaPredicted RBP6.96□□□□□ -1.3
HTT-206ENST00000509618 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
HTT-206ENST00000509618 AFDNP55196 1824 aaKnown RBP6.96□□□□□ -1.3
HTT-206ENST00000509618 AOC2O75106 756 aa6.95□□□□□ -1.3
HTT-206ENST00000509618 USPL1Q5W0Q7 1092 aa6.95□□□□□ -1.3
HTT-206ENST00000509618 MAP1SQ66K74 1059 aaPredicted RBP6.95□□□□□ -1.3
HTT-206ENST00000509618 INTS5Q6P9B9 1019 aaKnown RBP6.95□□□□□ -1.3
HTT-206ENST00000509618 COG3Q96JB2 828 aa6.95□□□□□ -1.3
HTT-206ENST00000509618 TAF1DQ9H5J8 278 aaPredicted RBP6.95□□□□□ -1.3
HTT-206ENST00000509618 ANKRD31Q8N7Z5 1873 aa6.95□□□□□ -1.3
HTT-206ENST00000509618 ZNF831Q5JPB2 1677 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 C21orf2O43822 256 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 GRM1Q13255 1194 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 NEUROD1Q13562 356 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 ERFEQ4G0M1 354 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
HTT-206ENST00000509618 RC3H1Q5TC82 1133 aaKnown RBP6.94□□□□□ -1.3
HTT-206ENST00000509618 CYP4F22Q6NT55 531 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 OLFM4Q6UX06 510 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 LDHDQ86WU2 507 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 C2CD5Q86YS7 1000 aa6.94□□□□□ -1.3
HTT-206ENST00000509618 COL4A5P29400 1685 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 SMG6Q86US8 1419 aaKnown RBP6.93□□□□□ -1.3
HTT-206ENST00000509618 TRAF5O00463 557 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 FYB1O15117 783 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
HTT-206ENST00000509618 TTLL6Q8N841 843 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 EYA1Q99502 592 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 FER1L6Q2WGJ9 1857 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 FLT4P35916 1363 aa6.93□□□□□ -1.3
HTT-206ENST00000509618 DEFB115Q30KQ5 88 aa6.92□□□□□ -1.3
HTT-206ENST00000509618 L3MBTL3Q96JM7 780 aaPredicted RBP6.92□□□□□ -1.3
HTT-206ENST00000509618 CAPNS2Q96L46 248 aa6.92□□□□□ -1.3
HTT-206ENST00000509618 SIN3AQ96ST3 1273 aa6.92□□□□□ -1.3
HTT-206ENST00000509618 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
HTT-206ENST00000509618 SOS1Q07889 1333 aaPredicted RBP6.92□□□□□ -1.3
HTT-206ENST00000509618 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
HTT-206ENST00000509618 CASP8AP2Q9UKL3 1982 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 DGKZQ13574 1117 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 DNAJC10Q8IXB1 793 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 TESK2Q96S53 571 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 TERF2IPQ9NYB0 399 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 SLX4Q8IY92 1834 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 TONSLQ96HA7 1378 aa6.91□□□□□ -1.3
HTT-206ENST00000509618 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
HTT-206ENST00000509618 ANKRD26Q9UPS8 1709 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 SERPINB2P05120 415 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 MAP2K1Q02750 393 aaPredicted RBP6.9□□□□□ -1.3
HTT-206ENST00000509618 PRPF38BQ5VTL8 546 aaKnown RBP6.9□□□□□ -1.3
HTT-206ENST00000509618 CST9Q5W186 159 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 DPY19L2Q6NUT2 758 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 BICDL1Q6ZP65 573 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 PAXIP1Q6ZW49 1069 aaPredicted RBP6.9□□□□□ -1.3
HTT-206ENST00000509618 CNTROBQ8N137 903 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 PCGF6Q9BYE7 350 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 ZBTB1Q9Y2K1 713 aa6.9□□□□□ -1.3
HTT-206ENST00000509618 EPHX2P34913 555 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 DLK2Q6UY11 383 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
HTT-206ENST00000509618 GPR101Q96P66 508 aaPredicted RBP6.89□□□□□ -1.31
HTT-206ENST00000509618 TAOK3Q9H2K8 898 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 DDX21Q9NR30 783 aaKnown RBP eCLIP6.89□□□□□ -1.31
HTT-206ENST00000509618 ZNF277Q9NRM2 450 aaPredicted RBP6.89□□□□□ -1.31
HTT-206ENST00000509618 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 COL15A1P39059 1388 aa6.89□□□□□ -1.31
HTT-206ENST00000509618 CACNA1SQ13698 1873 aa6.88□□□□□ -1.31
HTT-206ENST00000509618 TBC1D9BQ66K14 1250 aa6.88□□□□□ -1.31
HTT-206ENST00000509618 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
HTT-206ENST00000509618 C7orf43Q8WVR3 580 aa6.88□□□□□ -1.31
HTT-206ENST00000509618 CLEC11AQ9Y240 323 aa6.88□□□□□ -1.31
HTT-206ENST00000509618 SCN4AP35499 1836 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 KIF20BQ96Q89 1820 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 SNED1Q8TER0 1413 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
HTT-206ENST00000509618 CYP19A1P11511 503 aaPredicted RBP6.87□□□□□ -1.31
HTT-206ENST00000509618 EIF4A2Q14240 407 aaKnown RBP6.87□□□□□ -1.31
HTT-206ENST00000509618 CIAPIN1Q6FI81 312 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 AEBP1Q8IUX7 1158 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 CARD14Q9BXL6 1004 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 HACL1Q9UJ83 578 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 CUL9Q8IWT3 2517 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
HTT-206ENST00000509618 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms