RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LRRC59Q96AG4 307 aaKnown RBP21.84■■□□□ 1.09
CCHCR1-228ENST00000509552 TMX3Q96JJ7 454 aa21.84■■□□□ 1.09
CCHCR1-228ENST00000509552 SETD1BQ9UPS6 1966 aaKnown RBP21.84■■□□□ 1.09
CCHCR1-228ENST00000509552 HSP90AB4PQ58FF6 505 aa21.83■■□□□ 1.09
CCHCR1-228ENST00000509552 C1orf141Q5JVX7 400 aa21.83■■□□□ 1.09
CCHCR1-228ENST00000509552 UNC5CLQ8IV45 518 aa21.83■■□□□ 1.09
CCHCR1-228ENST00000509552 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 KCNQ3O43525 872 aa21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 NBPF7P0C2Y1 421 aaPredicted RBP21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 MPRIPQ6WCQ1 1025 aa21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 LMBRD1Q9NUN5 540 aa21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
CCHCR1-228ENST00000509552 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
CCHCR1-228ENST00000509552 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
CCHCR1-228ENST00000509552 GCP02774 474 aa21.81■■□□□ 1.08
CCHCR1-228ENST00000509552 NCLP19338 710 aaKnown RBP21.81■■□□□ 1.08
CCHCR1-228ENST00000509552 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
CCHCR1-228ENST00000509552 IL17RAQ96F46 866 aa21.8■■□□□ 1.08
CCHCR1-228ENST00000509552 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
CCHCR1-228ENST00000509552 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
CCHCR1-228ENST00000509552 ZDHHC9Q9Y397 364 aa21.8■■□□□ 1.08
CCHCR1-228ENST00000509552 CUL4AQ13619 759 aa21.79■■□□□ 1.08
CCHCR1-228ENST00000509552 ARHGEF25Q86VW2 580 aa21.79■■□□□ 1.08
CCHCR1-228ENST00000509552 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
CCHCR1-228ENST00000509552 TRIM44Q96DX7 344 aaPredicted RBP21.79■■□□□ 1.08
CCHCR1-228ENST00000509552 INTS4Q96HW7 963 aaKnown RBP21.79■■□□□ 1.08
CCHCR1-228ENST00000509552 RGPD2P0DJD1 1756 aa21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 CNTROBQ8N137 903 aa21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 PI4K2BQ8TCG2 481 aa21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 ZNF142P52746 1687 aaPredicted RBP21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 PRPF40AO75400 957 aaKnown RBP21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 HDAC5Q9UQL6 1122 aa21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 OVOS2A0A0G2JMS6 1433 aa21.78■■□□□ 1.08
CCHCR1-228ENST00000509552 ADCY9O60503 1353 aa21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 ANXA1P04083 346 aa21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 ZNF445P59923 1031 aa21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 OS9Q13438 667 aaPredicted RBP21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 CAVIN1Q6NZI2 390 aaKnown RBP21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 ANP32BQ92688 251 aaKnown RBP21.77■■□□□ 1.08
CCHCR1-228ENST00000509552 LMOD2Q6P5Q4 547 aa21.77■■□□□ 1.07
CCHCR1-228ENST00000509552 ANKRD24Q8TF21 1146 aa21.77■■□□□ 1.07
CCHCR1-228ENST00000509552 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
CCHCR1-228ENST00000509552 HSPA4P34932 840 aa21.76■■□□□ 1.07
CCHCR1-228ENST00000509552 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
CCHCR1-228ENST00000509552 ALDH1L1O75891 902 aa21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 NASPP49321 788 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 CLCN1P35523 988 aa21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 C9orf78Q9NZ63 289 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 SLIT3O75094 1523 aa21.75■■□□□ 1.07
CCHCR1-228ENST00000509552 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 PLEKHG5O94827 1062 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 MTX1Q13505 466 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 ZSCAN23Q3MJ62 389 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 MAP3K2Q9Y2U5 619 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 TTC41PQ6P2S7 1318 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 SGSM2O43147 1006 aa21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 NOL8Q76FK4 1167 aaKnown RBP21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 UPF3BQ9BZI7 483 aaKnown RBP21.74■■□□□ 1.07
CCHCR1-228ENST00000509552 CCDC173Q0VFZ6 552 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 KSR2Q6VAB6 950 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 PXDNQ92626 1479 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 BRD1O95696 1058 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 CLASRPQ8N2M8 674 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 IL25Q9H293 177 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 RAD50Q92878 1312 aa21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 USP42Q9H9J4 1324 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-228ENST00000509552 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 GLRX3O76003 335 aaKnown RBP21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 FOXD4L5Q5VV16 416 aaPredicted RBP21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 FOXD4L4Q8WXT5 416 aaPredicted RBP21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 HYPKQ9NX55 129 aa21.72■■□□□ 1.07
CCHCR1-228ENST00000509552 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
CCHCR1-228ENST00000509552 ESPNB1AK53 854 aa21.71■■□□□ 1.07
CCHCR1-228ENST00000509552 GPT2Q8TD30 523 aa21.71■■□□□ 1.07
CCHCR1-228ENST00000509552 GPATCH3Q96I76 525 aa21.71■■□□□ 1.07
CCHCR1-228ENST00000509552 HEG1Q9ULI3 1381 aa21.7■■□□□ 1.06
CCHCR1-228ENST00000509552 DDX58O95786 925 aaKnown RBP21.69■■□□□ 1.06
CCHCR1-228ENST00000509552 MBD3O95983 291 aa21.69■■□□□ 1.06
CCHCR1-228ENST00000509552 PROSER3Q2NL68 480 aa21.69■■□□□ 1.06
CCHCR1-228ENST00000509552 KRT28Q7Z3Y7 464 aa21.69■■□□□ 1.06
CCHCR1-228ENST00000509552 RUFY2Q8WXA3 655 aa21.68■■□□□ 1.06
CCHCR1-228ENST00000509552 PPP1R9BQ96SB3 815 aa21.68■■□□□ 1.06
CCHCR1-228ENST00000509552 LSG1Q9H089 658 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-228ENST00000509552 CWC27Q6UX04 472 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-228ENST00000509552 DIAPH3Q9NSV4 1193 aa21.68■■□□□ 1.06
CCHCR1-228ENST00000509552 IFIT2P09913 472 aaKnown RBP21.67■■□□□ 1.06
CCHCR1-228ENST00000509552 LINS1Q8NG48 757 aa21.67■■□□□ 1.06
CCHCR1-228ENST00000509552 ECHDC1Q9NTX5 307 aa21.67■■□□□ 1.06
CCHCR1-228ENST00000509552 AXIN2Q9Y2T1 843 aa21.67■■□□□ 1.06
CCHCR1-228ENST00000509552 SNX14Q9Y5W7 946 aa21.67■■□□□ 1.06
CCHCR1-228ENST00000509552 CWF19L2Q2TBE0 894 aaKnown RBP21.66■■□□□ 1.06
CCHCR1-228ENST00000509552 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCHCR1-228ENST00000509552 CAMTA1Q9Y6Y1 1673 aa21.66■■□□□ 1.06
CCHCR1-228ENST00000509552 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
CCHCR1-228ENST00000509552 PRAMEF22A3QJZ6 481 aa21.65■■□□□ 1.06
CCHCR1-228ENST00000509552 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
CCHCR1-228ENST00000509552 GRM8O00222 908 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms