RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 PRSS36Q5K4E3 855 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 FCHSD1Q86WN1 690 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 DDRGK1Q96HY6 314 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
XRCC4-204ENST00000509268 RFC5P40937 340 aa6.47□□□□□ -1.37
XRCC4-204ENST00000509268 NR1H3Q13133 447 aa6.47□□□□□ -1.37
XRCC4-204ENST00000509268 LRP8Q14114 963 aa6.47□□□□□ -1.37
XRCC4-204ENST00000509268 TBC1D9Q6ZT07 1266 aa6.47□□□□□ -1.37
XRCC4-204ENST00000509268 TNP2Q05952 138 aa6.46□□□□□ -1.38
XRCC4-204ENST00000509268 TMEM259Q4ZIN3 620 aa6.46□□□□□ -1.38
XRCC4-204ENST00000509268 H2AFB1P0C5Y9 115 aa6.45□□□□□ -1.38
XRCC4-204ENST00000509268 H2AFB2P0C5Z0 115 aa6.45□□□□□ -1.38
XRCC4-204ENST00000509268 ALAS2P22557 587 aa6.45□□□□□ -1.38
XRCC4-204ENST00000509268 MAPTP10636 758 aaKnown RBP6.44□□□□□ -1.38
XRCC4-204ENST00000509268 ZNF468Q5VIY5 522 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-204ENST00000509268 PRR12Q9ULL5 1215 aa6.44□□□□□ -1.38
XRCC4-204ENST00000509268 ELOA3CA0A087WX78 387 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-204ENST00000509268 ELOA3DA6NLF2 546 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-204ENST00000509268 ELOA3BQ3SY89 546 aa6.43□□□□□ -1.38
XRCC4-204ENST00000509268 ELOA3Q8NG57 546 aa6.43□□□□□ -1.38
XRCC4-204ENST00000509268 HYAL3O43820 417 aaPredicted RBP6.42□□□□□ -1.38
XRCC4-204ENST00000509268 CD33P20138 364 aa6.42□□□□□ -1.38
XRCC4-204ENST00000509268 TRIM28Q13263 835 aaKnown RBP6.42□□□□□ -1.38
XRCC4-204ENST00000509268 LAMC2Q13753 1193 aa6.42□□□□□ -1.38
XRCC4-204ENST00000509268 PRDM6Q9NQX0 595 aa6.42□□□□□ -1.38
XRCC4-204ENST00000509268 FAM157BP0CG42 384 aa6.41□□□□□ -1.38
XRCC4-204ENST00000509268 PLA2G4AP47712 749 aa6.41□□□□□ -1.38
XRCC4-204ENST00000509268 PCBP4P57723 403 aaKnown RBP6.41□□□□□ -1.38
XRCC4-204ENST00000509268 GJD4Q96KN9 370 aaPredicted RBP6.41□□□□□ -1.38
XRCC4-204ENST00000509268 A0A1W2PNR3 127 aa6.4□□□□□ -1.38
XRCC4-204ENST00000509268 KHNYNO15037 678 aaKnown RBP6.4□□□□□ -1.38
XRCC4-204ENST00000509268 ATP4AP20648 1035 aa6.4□□□□□ -1.38
XRCC4-204ENST00000509268 USP4Q13107 963 aa6.4□□□□□ -1.38
XRCC4-204ENST00000509268 TLR1Q15399 786 aa6.4□□□□□ -1.38
XRCC4-204ENST00000509268 NIFKQ9BYG3 293 aaKnown RBP6.4□□□□□ -1.38
XRCC4-204ENST00000509268 DCDC2BA2VCK2 349 aa6.4□□□□□ -1.39
XRCC4-204ENST00000509268 C9orf172C9J069 976 aa6.4□□□□□ -1.39
XRCC4-204ENST00000509268 CDCA7Q9BWT1 371 aaPredicted RBP6.4□□□□□ -1.39
XRCC4-204ENST00000509268 FAM117AQ9C073 453 aa6.4□□□□□ -1.39
XRCC4-204ENST00000509268 MARK1Q9P0L2 795 aa6.4□□□□□ -1.39
XRCC4-204ENST00000509268 HCN2Q9UL51 889 aa6.4□□□□□ -1.39
XRCC4-204ENST00000509268 SAMD5Q5TGI4 173 aa6.39□□□□□ -1.39
XRCC4-204ENST00000509268 AIDAQ96BJ3 306 aa6.39□□□□□ -1.39
XRCC4-204ENST00000509268 CCDC85AQ96PX6 553 aaPredicted RBP6.39□□□□□ -1.39
XRCC4-204ENST00000509268 MDFIQ99750 246 aa6.39□□□□□ -1.39
XRCC4-204ENST00000509268 ETNK1Q9HBU6 452 aa6.39□□□□□ -1.39
XRCC4-204ENST00000509268 CEP126Q9P2H0 1117 aa6.39□□□□□ -1.39
XRCC4-204ENST00000509268 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
XRCC4-204ENST00000509268 ARSJQ5FYB0 599 aaPredicted RBP6.38□□□□□ -1.39
XRCC4-204ENST00000509268 KDM4CQ9H3R0 1056 aa6.38□□□□□ -1.39
XRCC4-204ENST00000509268 SIN3BO75182 1162 aa6.37□□□□□ -1.39
XRCC4-204ENST00000509268 COL9A3Q14050 684 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-204ENST00000509268 NBPF1Q3BBV0 1214 aa6.37□□□□□ -1.39
XRCC4-204ENST00000509268 SIRT1Q96EB6 747 aa6.37□□□□□ -1.39
XRCC4-204ENST00000509268 ZDHHC3Q9NYG2 299 aa6.37□□□□□ -1.39
XRCC4-204ENST00000509268 TATP17735 454 aaPredicted RBP6.36□□□□□ -1.39
XRCC4-204ENST00000509268 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
XRCC4-204ENST00000509268 M0R082 166 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 EFSO43281 561 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 TXKP42681 527 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 ADGRE1Q14246 886 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 SYT9Q86SS6 491 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
XRCC4-204ENST00000509268 ZIC5Q96T25 663 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 GOPCQ9HD26 462 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 SOCS7O14512 581 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 NRG1Q02297 640 aaPredicted RBP6.35□□□□□ -1.39
XRCC4-204ENST00000509268 GRIK4Q16099 956 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
XRCC4-204ENST00000509268 PAX4O43316 350 aa6.34□□□□□ -1.39
XRCC4-204ENST00000509268 INHAP05111 366 aa6.34□□□□□ -1.39
XRCC4-204ENST00000509268 SMTNP53814 917 aa6.34□□□□□ -1.39
XRCC4-204ENST00000509268 MICALL1Q8N3F8 863 aa6.34□□□□□ -1.39
XRCC4-204ENST00000509268 TNFRSF25Q93038 417 aa6.34□□□□□ -1.39
XRCC4-204ENST00000509268 PCMTD1Q96MG8 357 aaPredicted RBP6.34□□□□□ -1.39
XRCC4-204ENST00000509268 ELNP15502 786 aa6.33□□□□□ -1.4
XRCC4-204ENST00000509268 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
XRCC4-204ENST00000509268 STRN4Q9NRL3 753 aa6.33□□□□□ -1.4
XRCC4-204ENST00000509268 DOLKQ9UPQ8 538 aa6.33□□□□□ -1.4
XRCC4-204ENST00000509268 CDK2AP1O14519 115 aa6.32□□□□□ -1.4
XRCC4-204ENST00000509268 NID1P14543 1247 aa6.32□□□□□ -1.4
XRCC4-204ENST00000509268 YBX3P16989 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
XRCC4-204ENST00000509268 MBTPS1Q14703 1052 aa6.32□□□□□ -1.4
XRCC4-204ENST00000509268 LENG1Q96BZ8 264 aaPredicted RBP6.32□□□□□ -1.4
XRCC4-204ENST00000509268 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
XRCC4-204ENST00000509268 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
XRCC4-204ENST00000509268 GDF10P55107 478 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 PHTF2Q8N3S3 785 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 RNF112Q9ULX5 631 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 NDUFB9Q9Y6M9 179 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 COBLO75128 1261 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 STAU1O95793 577 aaKnown RBP6.31□□□□□ -1.4
XRCC4-204ENST00000509268 SCNN1DP51172 638 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 TRAPPC3LQ5T215 181 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
XRCC4-204ENST00000509268 GPBP1L1Q9HC44 474 aaPredicted RBP6.31□□□□□ -1.4
XRCC4-204ENST00000509268 ALBP02768 609 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms