RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
LDB2-211ENST00000508918 KCPQ6ZWJ8 1503 aa17.15■□□□□ 0.34
LDB2-211ENST00000508918 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.15■□□□□ 0.34
LDB2-211ENST00000508918 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
LDB2-211ENST00000508918 VPS72Q15906 364 aa17.13■□□□□ 0.33
LDB2-211ENST00000508918 DDB1Q16531 1140 aa17.13■□□□□ 0.33
LDB2-211ENST00000508918 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
LDB2-211ENST00000508918 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.33
LDB2-211ENST00000508918 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
LDB2-211ENST00000508918 DOT1LQ8TEK3 1739 aa17.13■□□□□ 0.33
LDB2-211ENST00000508918 PDIA6Q15084 440 aa17.12■□□□□ 0.33
LDB2-211ENST00000508918 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
LDB2-211ENST00000508918 PIGBQ92521 554 aa17.12■□□□□ 0.33
LDB2-211ENST00000508918 MEIS3Q99687 375 aa17.12■□□□□ 0.33
LDB2-211ENST00000508918 USP21Q9UK80 565 aa17.11■□□□□ 0.33
LDB2-211ENST00000508918 ADCY9O60503 1353 aa17.1■□□□□ 0.33
LDB2-211ENST00000508918 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
LDB2-211ENST00000508918 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
LDB2-211ENST00000508918 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
LDB2-211ENST00000508918 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
LDB2-211ENST00000508918 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
LDB2-211ENST00000508918 BCL9O00512 1426 aa17.09■□□□□ 0.33
LDB2-211ENST00000508918 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
LDB2-211ENST00000508918 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
LDB2-211ENST00000508918 MYL6BP14649 208 aa17.08■□□□□ 0.32
LDB2-211ENST00000508918 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
LDB2-211ENST00000508918 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
LDB2-211ENST00000508918 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
LDB2-211ENST00000508918 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
LDB2-211ENST00000508918 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
LDB2-211ENST00000508918 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
LDB2-211ENST00000508918 SRCIN1Q9C0H9 1055 aa17.07■□□□□ 0.32
LDB2-211ENST00000508918 ATG3Q9NT62 314 aa17.07■□□□□ 0.32
LDB2-211ENST00000508918 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
LDB2-211ENST00000508918 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
LDB2-211ENST00000508918 RGS3P49796 1198 aa17.06■□□□□ 0.32
LDB2-211ENST00000508918 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
LDB2-211ENST00000508918 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
LDB2-211ENST00000508918 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
LDB2-211ENST00000508918 ERBB4Q15303 1308 aa17.06■□□□□ 0.32
LDB2-211ENST00000508918 GNAI3P08754 354 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
LDB2-211ENST00000508918 PRIM1P49642 420 aaKnown RBP17.05■□□□□ 0.32
LDB2-211ENST00000508918 BEND3Q5T5X7 828 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 CEP85Q6P2H3 762 aa17.05■□□□□ 0.32
LDB2-211ENST00000508918 RPAP2Q8IXW5 612 aaPredicted RBP17.05■□□□□ 0.32
LDB2-211ENST00000508918 AFF2P51816 1311 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 GNAI2P04899 355 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
LDB2-211ENST00000508918 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
LDB2-211ENST00000508918 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
LDB2-211ENST00000508918 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 ARFGEF2Q9Y6D5 1785 aa17.03■□□□□ 0.32
LDB2-211ENST00000508918 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
LDB2-211ENST00000508918 A1BGP04217 495 aa17.02■□□□□ 0.32
LDB2-211ENST00000508918 UBTFL1P0CB47 393 aaPredicted RBP17.02■□□□□ 0.32
LDB2-211ENST00000508918 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
LDB2-211ENST00000508918 A0A0G2JS52 829 aa17.01■□□□□ 0.31
LDB2-211ENST00000508918 MYT1Q01538 1121 aa17.01■□□□□ 0.31
LDB2-211ENST00000508918 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
LDB2-211ENST00000508918 NUCB1Q02818 461 aa17■□□□□ 0.31
LDB2-211ENST00000508918 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
LDB2-211ENST00000508918 DNAJC10Q8IXB1 793 aa17■□□□□ 0.31
LDB2-211ENST00000508918 LINS1Q8NG48 757 aa17■□□□□ 0.31
LDB2-211ENST00000508918 TJP1Q07157 1748 aa17■□□□□ 0.31
LDB2-211ENST00000508918 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
LDB2-211ENST00000508918 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
LDB2-211ENST00000508918 ATRNO75882 1429 aa16.99■□□□□ 0.31
LDB2-211ENST00000508918 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
LDB2-211ENST00000508918 HMMRO75330 724 aa16.99■□□□□ 0.31
LDB2-211ENST00000508918 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
LDB2-211ENST00000508918 SLC4A9Q96Q91 983 aa16.99■□□□□ 0.31
LDB2-211ENST00000508918 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
LDB2-211ENST00000508918 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
LDB2-211ENST00000508918 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
LDB2-211ENST00000508918 STARD3NLO95772 234 aa16.98■□□□□ 0.31
LDB2-211ENST00000508918 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
LDB2-211ENST00000508918 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
LDB2-211ENST00000508918 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
LDB2-211ENST00000508918 MYD88Q99836 296 aa16.98■□□□□ 0.31
LDB2-211ENST00000508918 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
LDB2-211ENST00000508918 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
LDB2-211ENST00000508918 PDE4AP27815 886 aa16.97■□□□□ 0.31
LDB2-211ENST00000508918 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
LDB2-211ENST00000508918 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
LDB2-211ENST00000508918 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
LDB2-211ENST00000508918 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
LDB2-211ENST00000508918 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
LDB2-211ENST00000508918 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
LDB2-211ENST00000508918 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms