RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
HMGCLL1-208ENST00000508459 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
HMGCLL1-208ENST00000508459 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
HMGCLL1-208ENST00000508459 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
HMGCLL1-208ENST00000508459 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
HMGCLL1-208ENST00000508459 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
HMGCLL1-208ENST00000508459 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
HMGCLL1-208ENST00000508459 DDX21Q9NR30 783 aaKnown RBP eCLIP18.36■□□□□ 0.53
HMGCLL1-208ENST00000508459 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
HMGCLL1-208ENST00000508459 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
HMGCLL1-208ENST00000508459 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
HMGCLL1-208ENST00000508459 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
HMGCLL1-208ENST00000508459 BTAF1O14981 1849 aa18.35■□□□□ 0.53
HMGCLL1-208ENST00000508459 LOC102724428A0A0B4J2F2 783 aa18.34■□□□□ 0.53
HMGCLL1-208ENST00000508459 SIK1P57059 783 aa18.34■□□□□ 0.53
HMGCLL1-208ENST00000508459 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
HMGCLL1-208ENST00000508459 CCDC125Q86Z20 511 aa18.34■□□□□ 0.53
HMGCLL1-208ENST00000508459 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
HMGCLL1-208ENST00000508459 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
HMGCLL1-208ENST00000508459 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
HMGCLL1-208ENST00000508459 KCNQ3O43525 872 aa18.32■□□□□ 0.52
HMGCLL1-208ENST00000508459 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
HMGCLL1-208ENST00000508459 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
HMGCLL1-208ENST00000508459 PLSCR1O15162 318 aa18.31■□□□□ 0.52
HMGCLL1-208ENST00000508459 BCAR3O75815 825 aa18.31■□□□□ 0.52
HMGCLL1-208ENST00000508459 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
HMGCLL1-208ENST00000508459 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
HMGCLL1-208ENST00000508459 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
HMGCLL1-208ENST00000508459 RGL2O15211 777 aa18.3■□□□□ 0.52
HMGCLL1-208ENST00000508459 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
HMGCLL1-208ENST00000508459 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 A0A087WZG4 1122 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 KCNQ2O43526 872 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 FLIIQ13045 1269 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
HMGCLL1-208ENST00000508459 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
HMGCLL1-208ENST00000508459 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
HMGCLL1-208ENST00000508459 LY75O60449 1722 aa18.28■□□□□ 0.52
HMGCLL1-208ENST00000508459 C5P01031 1676 aa18.28■□□□□ 0.52
HMGCLL1-208ENST00000508459 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 TRIM37O94972 964 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 DDX19BQ9UMR2 479 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
HMGCLL1-208ENST00000508459 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.51
HMGCLL1-208ENST00000508459 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
HMGCLL1-208ENST00000508459 KIF6Q6ZMV9 814 aa18.26■□□□□ 0.51
HMGCLL1-208ENST00000508459 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
HMGCLL1-208ENST00000508459 TJP1Q07157 1748 aa18.24■□□□□ 0.51
HMGCLL1-208ENST00000508459 TRIM27P14373 513 aa18.24■□□□□ 0.51
HMGCLL1-208ENST00000508459 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
HMGCLL1-208ENST00000508459 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
HMGCLL1-208ENST00000508459 ABCC4O15439 1325 aa18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 APBA3O96018 575 aa18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 BAG6P46379 1132 aa18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
HMGCLL1-208ENST00000508459 INTS3Q68E01 1043 aaKnown RBP18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 RREB1Q92766 1687 aa18.22■□□□□ 0.51
HMGCLL1-208ENST00000508459 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 MYL6BP14649 208 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 PDIA6Q15084 440 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 ATP10DQ9P241 1426 aa18.21■□□□□ 0.51
HMGCLL1-208ENST00000508459 ALDH1L1O75891 902 aa18.2■□□□□ 0.5
HMGCLL1-208ENST00000508459 AK7Q96M32 723 aa18.2■□□□□ 0.5
HMGCLL1-208ENST00000508459 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
HMGCLL1-208ENST00000508459 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
HMGCLL1-208ENST00000508459 ITPRIPQ8IWB1 547 aa18.19■□□□□ 0.5
HMGCLL1-208ENST00000508459 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
HMGCLL1-208ENST00000508459 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
HMGCLL1-208ENST00000508459 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 RPS6KA4O75676 772 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 A1BGP04217 495 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 GNAI3P08754 354 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
HMGCLL1-208ENST00000508459 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
HMGCLL1-208ENST00000508459 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
HMGCLL1-208ENST00000508459 PLIN1O60240 522 aa18.17■□□□□ 0.5
HMGCLL1-208ENST00000508459 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
HMGCLL1-208ENST00000508459 FKBP8Q14318 412 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms