RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-215ENST00000508438 ZPR1O75312 459 aa17.38■□□□□ 0.37
SH3TC1-215ENST00000508438 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-215ENST00000508438 FCHSD2O94868 740 aa17.37■□□□□ 0.37
SH3TC1-215ENST00000508438 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
SH3TC1-215ENST00000508438 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
SH3TC1-215ENST00000508438 NRXN2Q9P2S2 1712 aa17.36■□□□□ 0.37
SH3TC1-215ENST00000508438 TEFQ10587 303 aa17.36■□□□□ 0.37
SH3TC1-215ENST00000508438 TTC5Q8N0Z6 440 aa17.36■□□□□ 0.37
SH3TC1-215ENST00000508438 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
SH3TC1-215ENST00000508438 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
SH3TC1-215ENST00000508438 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 ARHGAP27Q6ZUM4 889 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
SH3TC1-215ENST00000508438 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
SH3TC1-215ENST00000508438 NFIXQ14938 502 aa17.34■□□□□ 0.37
SH3TC1-215ENST00000508438 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
SH3TC1-215ENST00000508438 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
SH3TC1-215ENST00000508438 STARD3NLO95772 234 aa17.33■□□□□ 0.36
SH3TC1-215ENST00000508438 CHRNA5P30532 468 aa17.33■□□□□ 0.36
SH3TC1-215ENST00000508438 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-215ENST00000508438 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
SH3TC1-215ENST00000508438 DLEC1Q9Y238 1755 aa17.31■□□□□ 0.36
SH3TC1-215ENST00000508438 KIF3CO14782 793 aa17.31■□□□□ 0.36
SH3TC1-215ENST00000508438 KCNQ3O43525 872 aa17.31■□□□□ 0.36
SH3TC1-215ENST00000508438 DALRD3Q5D0E6 543 aaKnown RBP17.31■□□□□ 0.36
SH3TC1-215ENST00000508438 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
SH3TC1-215ENST00000508438 SCN7AQ01118 1682 aa17.3■□□□□ 0.36
SH3TC1-215ENST00000508438 SERPINB2P05120 415 aa17.3■□□□□ 0.36
SH3TC1-215ENST00000508438 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-215ENST00000508438 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
SH3TC1-215ENST00000508438 SBF1O95248 1867 aa17.3■□□□□ 0.36
SH3TC1-215ENST00000508438 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
SH3TC1-215ENST00000508438 A0A087WZG4 1122 aa17.28■□□□□ 0.36
SH3TC1-215ENST00000508438 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
SH3TC1-215ENST00000508438 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
SH3TC1-215ENST00000508438 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.36
SH3TC1-215ENST00000508438 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.36
SH3TC1-215ENST00000508438 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
SH3TC1-215ENST00000508438 MCM10Q7L590 875 aa17.27■□□□□ 0.36
SH3TC1-215ENST00000508438 BCORQ6W2J9 1755 aa17.26■□□□□ 0.35
SH3TC1-215ENST00000508438 A1BGP04217 495 aa17.26■□□□□ 0.35
SH3TC1-215ENST00000508438 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
SH3TC1-215ENST00000508438 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
SH3TC1-215ENST00000508438 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
SH3TC1-215ENST00000508438 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
SH3TC1-215ENST00000508438 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
SH3TC1-215ENST00000508438 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
SH3TC1-215ENST00000508438 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
SH3TC1-215ENST00000508438 HSPA6P17066 643 aa17.24■□□□□ 0.35
SH3TC1-215ENST00000508438 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
SH3TC1-215ENST00000508438 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
SH3TC1-215ENST00000508438 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
SH3TC1-215ENST00000508438 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
SH3TC1-215ENST00000508438 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
SH3TC1-215ENST00000508438 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
SH3TC1-215ENST00000508438 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
SH3TC1-215ENST00000508438 COL11A2P13942 1736 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-215ENST00000508438 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
SH3TC1-215ENST00000508438 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
SH3TC1-215ENST00000508438 H0YIN7 160 aa17.21■□□□□ 0.35
SH3TC1-215ENST00000508438 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-215ENST00000508438 RASSF7Q02833 373 aa17.21■□□□□ 0.35
SH3TC1-215ENST00000508438 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
SH3TC1-215ENST00000508438 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
SH3TC1-215ENST00000508438 TOMM70O94826 608 aa17.2■□□□□ 0.34
SH3TC1-215ENST00000508438 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
SH3TC1-215ENST00000508438 PRELPP51888 382 aa17.2■□□□□ 0.34
SH3TC1-215ENST00000508438 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
SH3TC1-215ENST00000508438 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
SH3TC1-215ENST00000508438 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
SH3TC1-215ENST00000508438 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
SH3TC1-215ENST00000508438 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
SH3TC1-215ENST00000508438 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 TAF7Q15545 349 aaPredicted RBP17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
SH3TC1-215ENST00000508438 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 PDE6BP35913 854 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
SH3TC1-215ENST00000508438 FER1L6Q2WGJ9 1857 aa17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 NFKBIEO00221 500 aa17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 LMNB1P20700 586 aa17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
SH3TC1-215ENST00000508438 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
SH3TC1-215ENST00000508438 NEFMP07197 916 aa17.15■□□□□ 0.34
SH3TC1-215ENST00000508438 CLEC4GQ6UXB4 293 aa17.15■□□□□ 0.34
SH3TC1-215ENST00000508438 ZC3H4Q9UPT8 1303 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms