RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.68
NEDD4-207ENST00000508075 BCS1LQ9Y276 419 aa19.33■□□□□ 0.68
NEDD4-207ENST00000508075 ZNF330Q9Y3S2 320 aaPredicted RBP19.32■□□□□ 0.68
NEDD4-207ENST00000508075 ATP10DQ9P241 1426 aa19.32■□□□□ 0.68
NEDD4-207ENST00000508075 BRCA1P38398 1863 aaKnown RBP19.31■□□□□ 0.68
NEDD4-207ENST00000508075 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
NEDD4-207ENST00000508075 MCM10Q7L590 875 aa19.31■□□□□ 0.68
NEDD4-207ENST00000508075 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
NEDD4-207ENST00000508075 COL15A1P39059 1388 aa19.31■□□□□ 0.68
NEDD4-207ENST00000508075 CHRNA5P30532 468 aa19.3■□□□□ 0.68
NEDD4-207ENST00000508075 BCL2L12Q9HB09 334 aa19.3■□□□□ 0.68
NEDD4-207ENST00000508075 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 PRAMEF22A3QJZ6 481 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 ZPR1O75312 459 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 BICDL1Q6ZP65 573 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
NEDD4-207ENST00000508075 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
NEDD4-207ENST00000508075 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
NEDD4-207ENST00000508075 FCHSD2O94868 740 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 A1BGP04217 495 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 KCNA3P22001 575 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 NFIXQ14938 502 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 CCDC24Q8N4L8 307 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.68
NEDD4-207ENST00000508075 TM4SF1P30408 202 aa19.26■□□□□ 0.67
NEDD4-207ENST00000508075 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
NEDD4-207ENST00000508075 TGFB2P61812 414 aa19.26■□□□□ 0.67
NEDD4-207ENST00000508075 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 BTBD11A6QL63 1104 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 NARFQ9UHQ1 456 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
NEDD4-207ENST00000508075 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
NEDD4-207ENST00000508075 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
NEDD4-207ENST00000508075 ADCY9O60503 1353 aa19.23■□□□□ 0.67
NEDD4-207ENST00000508075 CARMIL3Q8ND23 1372 aa19.23■□□□□ 0.67
NEDD4-207ENST00000508075 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
NEDD4-207ENST00000508075 ARFGEF1Q9Y6D6 1849 aa19.23■□□□□ 0.67
NEDD4-207ENST00000508075 STARD3NLO95772 234 aa19.22■□□□□ 0.67
NEDD4-207ENST00000508075 FMNL2Q96PY5 1086 aa19.22■□□□□ 0.67
NEDD4-207ENST00000508075 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
NEDD4-207ENST00000508075 SERPINB2P05120 415 aa19.21■□□□□ 0.67
NEDD4-207ENST00000508075 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
NEDD4-207ENST00000508075 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
NEDD4-207ENST00000508075 TBC1D9BQ66K14 1250 aa19.21■□□□□ 0.67
NEDD4-207ENST00000508075 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
NEDD4-207ENST00000508075 NRXN2Q9P2S2 1712 aa19.21■□□□□ 0.67
NEDD4-207ENST00000508075 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
NEDD4-207ENST00000508075 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
NEDD4-207ENST00000508075 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
NEDD4-207ENST00000508075 PIM2Q9P1W9 311 aa19.19■□□□□ 0.66
NEDD4-207ENST00000508075 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
NEDD4-207ENST00000508075 BCORQ6W2J9 1755 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 SBF1O95248 1867 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 RASSF7Q02833 373 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
NEDD4-207ENST00000508075 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
NEDD4-207ENST00000508075 COL11A2P13942 1736 aaPredicted RBP19.16■□□□□ 0.66
NEDD4-207ENST00000508075 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
NEDD4-207ENST00000508075 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
NEDD4-207ENST00000508075 NBPF26B4DH59 902 aa19.14■□□□□ 0.65
NEDD4-207ENST00000508075 CAMTA2O94983 1202 aa19.14■□□□□ 0.65
NEDD4-207ENST00000508075 IL6STP40189 918 aaPredicted RBP19.14■□□□□ 0.65
NEDD4-207ENST00000508075 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
NEDD4-207ENST00000508075 DZIP3Q86Y13 1208 aaKnown RBP19.14■□□□□ 0.65
NEDD4-207ENST00000508075 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
NEDD4-207ENST00000508075 NBPF15Q8N660 670 aa19.14■□□□□ 0.65
NEDD4-207ENST00000508075 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
NEDD4-207ENST00000508075 KDM3BQ7LBC6 1761 aa19.14■□□□□ 0.65
NEDD4-207ENST00000508075 A0A087WZG4 1122 aa19.13■□□□□ 0.65
NEDD4-207ENST00000508075 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
NEDD4-207ENST00000508075 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
NEDD4-207ENST00000508075 SNRPA1P09661 255 aaKnown RBP19.12■□□□□ 0.65
NEDD4-207ENST00000508075 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
NEDD4-207ENST00000508075 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
NEDD4-207ENST00000508075 NMRK2Q9NPI5 230 aa19.12■□□□□ 0.65
NEDD4-207ENST00000508075 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
NEDD4-207ENST00000508075 KIF3CO14782 793 aa19.11■□□□□ 0.65
NEDD4-207ENST00000508075 NFE2L2Q16236 605 aa19.11■□□□□ 0.65
NEDD4-207ENST00000508075 CCDC146Q8IYE0 955 aa19.11■□□□□ 0.65
NEDD4-207ENST00000508075 RNF181Q9P0P0 153 aa19.11■□□□□ 0.65
NEDD4-207ENST00000508075 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
NEDD4-207ENST00000508075 NEFMP07197 916 aa19.1■□□□□ 0.65
NEDD4-207ENST00000508075 PRELPP51888 382 aa19.1■□□□□ 0.65
NEDD4-207ENST00000508075 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
NEDD4-207ENST00000508075 ZNF622Q969S3 477 aaKnown RBP eCLIP19.1■□□□□ 0.65
NEDD4-207ENST00000508075 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
NEDD4-207ENST00000508075 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.65
NEDD4-207ENST00000508075 NPHP1O15259 732 aa19.08■□□□□ 0.64
NEDD4-207ENST00000508075 SLX4Q8IY92 1834 aa19.07■□□□□ 0.64
NEDD4-207ENST00000508075 H0YIN7 160 aa19.07■□□□□ 0.64
NEDD4-207ENST00000508075 HLFQ16534 295 aa19.07■□□□□ 0.64
NEDD4-207ENST00000508075 SETDB2Q96T68 719 aa19.07■□□□□ 0.64
NEDD4-207ENST00000508075 MYL6BP14649 208 aa19.06■□□□□ 0.64
NEDD4-207ENST00000508075 NEUROD2Q15784 382 aa19.06■□□□□ 0.64
NEDD4-207ENST00000508075 TTLL6Q8N841 843 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms