RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 IFNLR1Q8IU57 520 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-204ENST00000507996 SPDYE4A6NLX3 237 aa7.43□□□□□ -1.22
KDM3B-204ENST00000507996 UBAP1LF5GYI3 381 aa7.43□□□□□ -1.22
KDM3B-204ENST00000507996 CAVIN1Q6NZI2 390 aaKnown RBP7.43□□□□□ -1.22
KDM3B-204ENST00000507996 PNPLA6Q8IY17 1366 aa7.43□□□□□ -1.22
KDM3B-204ENST00000507996 PHACTR3Q96KR7 559 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 SPINK5Q9NQ38 1064 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-204ENST00000507996 COG6Q9Y2V7 657 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 SPATA31A3Q5VYP0 1347 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 FLT4P35916 1363 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 GPT2Q8TD30 523 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 PANK1Q8TE04 598 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 JARID2Q92833 1246 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-204ENST00000507996 SBNO1A3KN83 1393 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 KIF1AQ12756 1690 aa7.42□□□□□ -1.22
KDM3B-204ENST00000507996 COL3A1P02461 1466 aaPredicted RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 CDK12Q9NYV4 1490 aaPredicted RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 TOM1O60784 492 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 FCHSD2O94868 740 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 MBD3O95983 291 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 CSB-PGBD3P0DP91 1061 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 TSC1Q92574 1164 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 LRRC59Q96AG4 307 aaKnown RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 EYA1Q99502 592 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.225e-8■■■□□ 18.9
KDM3B-204ENST00000507996 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 AK9Q5TCS8 1911 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 TPM3P06753 285 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 TMPOP42166 694 aaKnown RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 WWC1Q8IX03 1113 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 IP6K1Q92551 441 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 PLEKHF1Q96S99 279 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 FEZ2Q9UHY8 353 aaPredicted RBP7.41□□□□□ -1.22
KDM3B-204ENST00000507996 AXIN2Q9Y2T1 843 aa7.41□□□□□ -1.22
KDM3B-204ENST00000507996 TNS3Q68CZ2 1445 aa7.4□□□□□ -1.22
KDM3B-204ENST00000507996 ARHGEF25Q86VW2 580 aa7.4□□□□□ -1.22
KDM3B-204ENST00000507996 SOS2Q07890 1332 aaPredicted RBP7.4□□□□□ -1.23
KDM3B-204ENST00000507996 RIOK3O14730 519 aaKnown RBP7.4□□□□□ -1.23
KDM3B-204ENST00000507996 RARSP54136 660 aaKnown RBP7.4□□□□□ -1.23
KDM3B-204ENST00000507996 KIF18AQ8NI77 898 aa7.4□□□□□ -1.23
KDM3B-204ENST00000507996 THUMPD2Q9BTF0 503 aaKnown RBP7.4□□□□□ -1.23
KDM3B-204ENST00000507996 PRDM11Q9NQV5 511 aa7.4□□□□□ -1.23
KDM3B-204ENST00000507996 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.23
KDM3B-204ENST00000507996 PEAK1Q9H792 1746 aa7.4□□□□□ -1.23
KDM3B-204ENST00000507996 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
KDM3B-204ENST00000507996 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
KDM3B-204ENST00000507996 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
KDM3B-204ENST00000507996 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
KDM3B-204ENST00000507996 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
KDM3B-204ENST00000507996 ANKRD24Q8TF21 1146 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 NLRP2Q9NX02 1062 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 PXDNQ92626 1479 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 DCTN1Q14203 1278 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 BMP2KLQ5H9B9 411 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 MCTP1Q6DN14 999 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 KRT222Q8N1A0 295 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 KIAA1524Q8TCG1 905 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 ARHGEF10O15013 1369 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 KIAA0232Q92628 1395 aa7.39□□□□□ -1.23
KDM3B-204ENST00000507996 FAM83GA6ND36 823 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 MVPQ14764 893 aaKnown RBP7.38□□□□□ -1.23
KDM3B-204ENST00000507996 TRIM34Q9BYJ4 488 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 STRN4Q9NRL3 753 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 TRPM3Q9HCF6 1732 aaPredicted RBP7.38□□□□□ -1.23
KDM3B-204ENST00000507996 PTMAP06454 111 aaKnown RBP7.38□□□□□ -1.23
KDM3B-204ENST00000507996 CYP2C19P33261 490 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 NOP2P46087 812 aaKnown RBP7.38□□□□□ -1.23
KDM3B-204ENST00000507996 SLFNL1Q499Z3 407 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 MUM1L1Q5H9M0 696 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 LTN1O94822 1766 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
KDM3B-204ENST00000507996 REC8O95072 547 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 ADAMTS2O95450 1211 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 RLBP1P12271 317 aa7.38□□□□□ -1.23
KDM3B-204ENST00000507996 SMTNL1A8MU46 457 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 EVA1CP58658 441 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 NFE2L2Q16236 605 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 BRMS1Q9HCU9 246 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 TRIM35Q9UPQ4 493 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 HDAC5Q9UQL6 1122 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 MED1Q15648 1581 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-204ENST00000507996 ROBO1Q9Y6N7 1651 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 NFAT5O94916 1531 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 SYCE3A1L190 88 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 IGSF3O75054 1194 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 PHF14O94880 888 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 TSR2Q969E8 191 aaKnown RBP7.37□□□□□ -1.23
KDM3B-204ENST00000507996 KIF1BPQ96EK5 621 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
KDM3B-204ENST00000507996 CT47B1P0C2W7 299 aaPredicted RBP7.36□□□□□ -1.23
KDM3B-204ENST00000507996 NUCB1Q02818 461 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 RABEP1Q15276 862 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms