RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 DLEC1Q9Y238 1755 aa21.59■■□□□ 1.05
HOXC4-203ENST00000507650 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
HOXC4-203ENST00000507650 HEG1Q9ULI3 1381 aa21.58■■□□□ 1.04
HOXC4-203ENST00000507650 GRIN3BO60391 1043 aa21.57■■□□□ 1.04
HOXC4-203ENST00000507650 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
HOXC4-203ENST00000507650 BCL2L12Q9HB09 334 aa21.57■■□□□ 1.04
HOXC4-203ENST00000507650 ANKRD31Q8N7Z5 1873 aa21.57■■□□□ 1.04
HOXC4-203ENST00000507650 FCHSD2O94868 740 aa21.56■■□□□ 1.04
HOXC4-203ENST00000507650 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
HOXC4-203ENST00000507650 ADCY9O60503 1353 aa21.56■■□□□ 1.04
HOXC4-203ENST00000507650 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
HOXC4-203ENST00000507650 TM4SF1P30408 202 aa21.55■■□□□ 1.04
HOXC4-203ENST00000507650 TEFQ10587 303 aa21.55■■□□□ 1.04
HOXC4-203ENST00000507650 MCM10Q7L590 875 aa21.55■■□□□ 1.04
HOXC4-203ENST00000507650 LAMB4A4D0S4 1761 aa21.55■■□□□ 1.04
HOXC4-203ENST00000507650 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
HOXC4-203ENST00000507650 KCNA3P22001 575 aa21.54■■□□□ 1.04
HOXC4-203ENST00000507650 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
HOXC4-203ENST00000507650 DPEP1P16444 411 aa21.53■■□□□ 1.04
HOXC4-203ENST00000507650 TTC5Q8N0Z6 440 aa21.53■■□□□ 1.04
HOXC4-203ENST00000507650 PLEKHF1Q96S99 279 aa21.53■■□□□ 1.04
HOXC4-203ENST00000507650 NARFQ9UHQ1 456 aa21.53■■□□□ 1.04
HOXC4-203ENST00000507650 PARP3Q9Y6F1 533 aa21.53■■□□□ 1.04
HOXC4-203ENST00000507650 PRAMEF22A3QJZ6 481 aa21.52■■□□□ 1.04
HOXC4-203ENST00000507650 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
HOXC4-203ENST00000507650 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
HOXC4-203ENST00000507650 COL11A2P13942 1736 aaPredicted RBP21.52■■□□□ 1.03
HOXC4-203ENST00000507650 TGFB2P61812 414 aa21.51■■□□□ 1.03
HOXC4-203ENST00000507650 ATP10DQ9P241 1426 aa21.51■■□□□ 1.03
HOXC4-203ENST00000507650 SBF1O95248 1867 aa21.51■■□□□ 1.03
HOXC4-203ENST00000507650 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
HOXC4-203ENST00000507650 NFIXQ14938 502 aa21.5■■□□□ 1.03
HOXC4-203ENST00000507650 CARMIL3Q8ND23 1372 aa21.49■■□□□ 1.03
HOXC4-203ENST00000507650 ZPR1O75312 459 aa21.48■■□□□ 1.03
HOXC4-203ENST00000507650 A1BGP04217 495 aa21.48■■□□□ 1.03
HOXC4-203ENST00000507650 FMNL2Q96PY5 1086 aa21.48■■□□□ 1.03
HOXC4-203ENST00000507650 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
HOXC4-203ENST00000507650 STARD3NLO95772 234 aa21.46■■□□□ 1.03
HOXC4-203ENST00000507650 CHRNA5P30532 468 aa21.46■■□□□ 1.03
HOXC4-203ENST00000507650 PIP4K2AP48426 406 aaPredicted RBP21.46■■□□□ 1.03
HOXC4-203ENST00000507650 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
HOXC4-203ENST00000507650 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
HOXC4-203ENST00000507650 BCS1LQ9Y276 419 aa21.45■■□□□ 1.02
HOXC4-203ENST00000507650 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
HOXC4-203ENST00000507650 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
HOXC4-203ENST00000507650 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
HOXC4-203ENST00000507650 TBC1D9BQ66K14 1250 aa21.43■■□□□ 1.02
HOXC4-203ENST00000507650 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
HOXC4-203ENST00000507650 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
HOXC4-203ENST00000507650 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
HOXC4-203ENST00000507650 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
HOXC4-203ENST00000507650 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
HOXC4-203ENST00000507650 CAMTA2O94983 1202 aa21.41■■□□□ 1.02
HOXC4-203ENST00000507650 SERPINB2P05120 415 aa21.41■■□□□ 1.02
HOXC4-203ENST00000507650 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 RALBP1Q15311 655 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
HOXC4-203ENST00000507650 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
HOXC4-203ENST00000507650 NUP98P52948 1817 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
HOXC4-203ENST00000507650 C1QTNF8P60827 252 aa21.39■■□□□ 1.01
HOXC4-203ENST00000507650 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-203ENST00000507650 BICDL1Q6ZP65 573 aa21.39■■□□□ 1.01
HOXC4-203ENST00000507650 A0A087WZG4 1122 aa21.38■■□□□ 1.01
HOXC4-203ENST00000507650 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
HOXC4-203ENST00000507650 PIM2Q9P1W9 311 aa21.38■■□□□ 1.01
HOXC4-203ENST00000507650 ZNF526Q8TF50 670 aaPredicted RBP21.37■■□□□ 1.01
HOXC4-203ENST00000507650 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
HOXC4-203ENST00000507650 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
HOXC4-203ENST00000507650 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
HOXC4-203ENST00000507650 CCDC24Q8N4L8 307 aa21.36■■□□□ 1.01
HOXC4-203ENST00000507650 FER1L6Q2WGJ9 1857 aa21.36■■□□□ 1.01
HOXC4-203ENST00000507650 SLX4Q8IY92 1834 aa21.36■■□□□ 1.01
HOXC4-203ENST00000507650 DALRD3Q5D0E6 543 aaKnown RBP21.35■■□□□ 1.01
HOXC4-203ENST00000507650 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
HOXC4-203ENST00000507650 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
HOXC4-203ENST00000507650 DZIP3Q86Y13 1208 aaKnown RBP21.34■■□□□ 1.01
HOXC4-203ENST00000507650 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
HOXC4-203ENST00000507650 PRELPP51888 382 aa21.33■■□□□ 1.01
HOXC4-203ENST00000507650 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1.01
HOXC4-203ENST00000507650 DICER1Q9UPY3 1922 aaKnown RBP21.32■■□□□ 1
HOXC4-203ENST00000507650 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
HOXC4-203ENST00000507650 CEP350Q5VT06 3117 aa21.31■■□□□ 1
HOXC4-203ENST00000507650 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
HOXC4-203ENST00000507650 GPBP1L1Q9HC44 474 aaPredicted RBP21.31■■□□□ 1
HOXC4-203ENST00000507650 KIF3CO14782 793 aa21.3■■□□□ 1
HOXC4-203ENST00000507650 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
HOXC4-203ENST00000507650 TMPOP42166 694 aaKnown RBP21.29■■□□□ 1
HOXC4-203ENST00000507650 RASSF7Q02833 373 aa21.29■■□□□ 1
HOXC4-203ENST00000507650 C9orf131Q5VYM1 1079 aa21.29■■□□□ 1
HOXC4-203ENST00000507650 NEFMP07197 916 aa21.28■■□□□ 1
HOXC4-203ENST00000507650 RIPK4P57078 832 aa21.28■■□□□ 1
HOXC4-203ENST00000507650 HLFQ16534 295 aa21.28■■□□□ 1
HOXC4-203ENST00000507650 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
HOXC4-203ENST00000507650 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
HOXC4-203ENST00000507650 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
HOXC4-203ENST00000507650 BRIP1Q9BX63 1249 aa21.27■■□□□ 1
HOXC4-203ENST00000507650 ANKRD36CQ5JPF3 1778 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms