RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
RPS3A-206ENST00000507485 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
RPS3A-206ENST00000507485 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
RPS3A-206ENST00000507485 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
RPS3A-206ENST00000507485 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
RPS3A-206ENST00000507485 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
RPS3A-206ENST00000507485 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
RPS3A-206ENST00000507485 MSL1Q68DK7 614 aa12.56□□□□□ -0.4
RPS3A-206ENST00000507485 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
RPS3A-206ENST00000507485 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
RPS3A-206ENST00000507485 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
RPS3A-206ENST00000507485 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
RPS3A-206ENST00000507485 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
RPS3A-206ENST00000507485 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
RPS3A-206ENST00000507485 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
RPS3A-206ENST00000507485 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.44e-12■■□□□ 11.4
RPS3A-206ENST00000507485 POLD1P28340 1107 aa12.54□□□□□ -0.4
RPS3A-206ENST00000507485 GPR162Q16538 588 aa12.54□□□□□ -0.4
RPS3A-206ENST00000507485 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
RPS3A-206ENST00000507485 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
RPS3A-206ENST00000507485 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
RPS3A-206ENST00000507485 UBR3Q6ZT12 1888 aa12.52□□□□□ -0.4
RPS3A-206ENST00000507485 PIGBQ92521 554 aa12.52□□□□□ -0.4
RPS3A-206ENST00000507485 EYA1Q99502 592 aa12.52□□□□□ -0.4
RPS3A-206ENST00000507485 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
RPS3A-206ENST00000507485 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
RPS3A-206ENST00000507485 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
RPS3A-206ENST00000507485 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
RPS3A-206ENST00000507485 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
RPS3A-206ENST00000507485 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
RPS3A-206ENST00000507485 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
RPS3A-206ENST00000507485 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
RPS3A-206ENST00000507485 ITPK1Q13572 414 aa12.48□□□□□ -0.41
RPS3A-206ENST00000507485 EIF4A2Q14240 407 aaKnown RBP12.48□□□□□ -0.41
RPS3A-206ENST00000507485 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
RPS3A-206ENST00000507485 ASAP1Q9ULH1 1129 aa12.48□□□□□ -0.41
RPS3A-206ENST00000507485 PHF14O94880 888 aa12.47□□□□□ -0.41
RPS3A-206ENST00000507485 PHKG2P15735 406 aa12.47□□□□□ -0.41
RPS3A-206ENST00000507485 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
RPS3A-206ENST00000507485 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
RPS3A-206ENST00000507485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.42
RPS3A-206ENST00000507485 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 SIK1P57059 783 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.42
RPS3A-206ENST00000507485 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
RPS3A-206ENST00000507485 KDRP35968 1356 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
RPS3A-206ENST00000507485 LSM11P83369 360 aaKnown RBP eCLIP12.45□□□□□ -0.42
RPS3A-206ENST00000507485 AK7Q96M32 723 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
RPS3A-206ENST00000507485 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
RPS3A-206ENST00000507485 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
RPS3A-206ENST00000507485 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
RPS3A-206ENST00000507485 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
RPS3A-206ENST00000507485 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
RPS3A-206ENST00000507485 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
RPS3A-206ENST00000507485 PBX2P40425 430 aa12.43□□□□□ -0.42
RPS3A-206ENST00000507485 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
RPS3A-206ENST00000507485 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
RPS3A-206ENST00000507485 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
RPS3A-206ENST00000507485 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.426e-9■□□□□ 10
RPS3A-206ENST00000507485 PANK3Q9H999 370 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
RPS3A-206ENST00000507485 ADCY9O60503 1353 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 GNPATO15228 680 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 SSFA2P28290 1259 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
RPS3A-206ENST00000507485 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
RPS3A-206ENST00000507485 CLSPNQ9HAW4 1339 aa12.41□□□□□ -0.42
RPS3A-206ENST00000507485 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
RPS3A-206ENST00000507485 MYH14Q7Z406 1995 aaKnown RBP12.4□□□□□ -0.42
RPS3A-206ENST00000507485 KIF13BQ9NQT8 1826 aa12.4□□□□□ -0.42
RPS3A-206ENST00000507485 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPS3A-206ENST00000507485 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
RPS3A-206ENST00000507485 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
RPS3A-206ENST00000507485 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
RPS3A-206ENST00000507485 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
RPS3A-206ENST00000507485 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
RPS3A-206ENST00000507485 TJP1Q07157 1748 aa12.38□□□□□ -0.43
RPS3A-206ENST00000507485 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
RPS3A-206ENST00000507485 MMP10P09238 476 aa12.37□□□□□ -0.43
RPS3A-206ENST00000507485 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
RPS3A-206ENST00000507485 KIF3CO14782 793 aa12.37□□□□□ -0.43
RPS3A-206ENST00000507485 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
RPS3A-206ENST00000507485 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
RPS3A-206ENST00000507485 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
RPS3A-206ENST00000507485 ZNF526Q8TF50 670 aaPredicted RBP12.36□□□□□ -0.43
RPS3A-206ENST00000507485 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
RPS3A-206ENST00000507485 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms