RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 TAF1DQ9H5J8 278 aaPredicted RBP11.18□□□□□ -0.62
CLDND1-214ENST00000507411 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
CLDND1-214ENST00000507411 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
CLDND1-214ENST00000507411 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
CLDND1-214ENST00000507411 NFKBIEO00221 500 aa11.17□□□□□ -0.62
CLDND1-214ENST00000507411 MAP2K2P36507 400 aa11.17□□□□□ -0.62
CLDND1-214ENST00000507411 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
CLDND1-214ENST00000507411 MEGF6O75095 1541 aa11.17□□□□□ -0.62
CLDND1-214ENST00000507411 AOC2O75106 756 aa11.16□□□□□ -0.62
CLDND1-214ENST00000507411 RFC4P35249 363 aa11.16□□□□□ -0.62
CLDND1-214ENST00000507411 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
CLDND1-214ENST00000507411 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
CLDND1-214ENST00000507411 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
CLDND1-214ENST00000507411 ITPK1Q13572 414 aa11.15□□□□□ -0.62
CLDND1-214ENST00000507411 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
CLDND1-214ENST00000507411 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
CLDND1-214ENST00000507411 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
CLDND1-214ENST00000507411 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
CLDND1-214ENST00000507411 SCN4AP35499 1836 aa11.14□□□□□ -0.63
CLDND1-214ENST00000507411 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
CLDND1-214ENST00000507411 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
CLDND1-214ENST00000507411 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
CLDND1-214ENST00000507411 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CLDND1-214ENST00000507411 TTLL6Q8N841 843 aa11.13□□□□□ -0.63
CLDND1-214ENST00000507411 DCAF11Q8TEB1 546 aa11.13□□□□□ -0.63
CLDND1-214ENST00000507411 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
CLDND1-214ENST00000507411 ITGB4P16144 1822 aa11.12□□□□□ -0.63
CLDND1-214ENST00000507411 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-214ENST00000507411 DDR1Q08345 913 aa11.12□□□□□ -0.63
CLDND1-214ENST00000507411 PIGBQ92521 554 aa11.12□□□□□ -0.63
CLDND1-214ENST00000507411 IP6K1Q92551 441 aa11.12□□□□□ -0.63
CLDND1-214ENST00000507411 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-214ENST00000507411 DDX21Q9NR30 783 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLDND1-214ENST00000507411 PCDH11XQ9BZA7 1347 aa11.11□□□□□ -0.63
CLDND1-214ENST00000507411 PCDH11YQ9BZA8 1340 aa11.11□□□□□ -0.63
CLDND1-214ENST00000507411 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-214ENST00000507411 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
CLDND1-214ENST00000507411 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
CLDND1-214ENST00000507411 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
CLDND1-214ENST00000507411 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
CLDND1-214ENST00000507411 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
CLDND1-214ENST00000507411 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
CLDND1-214ENST00000507411 CENPJQ9HC77 1338 aaPredicted RBP11.09□□□□□ -0.63
CLDND1-214ENST00000507411 EPHX2P34913 555 aa11.09□□□□□ -0.63
CLDND1-214ENST00000507411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLDND1-214ENST00000507411 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 CIAPIN1Q6FI81 312 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 STAC3Q96MF2 364 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 SMG6Q86US8 1419 aaKnown RBP11.08□□□□□ -0.64
CLDND1-214ENST00000507411 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
CLDND1-214ENST00000507411 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
CLDND1-214ENST00000507411 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
CLDND1-214ENST00000507411 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
CLDND1-214ENST00000507411 NME9Q86XW9 330 aa11.07□□□□□ -0.64
CLDND1-214ENST00000507411 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
CLDND1-214ENST00000507411 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
CLDND1-214ENST00000507411 CTU1Q7Z7A3 348 aaKnown RBP11.06□□□□□ -0.64
CLDND1-214ENST00000507411 TAOK3Q9H2K8 898 aa11.06□□□□□ -0.64
CLDND1-214ENST00000507411 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
CLDND1-214ENST00000507411 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
CLDND1-214ENST00000507411 CYP27B1O15528 508 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 C21orf2O43822 256 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 FMR1Q06787 632 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLDND1-214ENST00000507411 FER1L6Q2WGJ9 1857 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 C2CD5Q86YS7 1000 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 LTBP3Q9NS15 1303 aa11.05□□□□□ -0.64
CLDND1-214ENST00000507411 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 H0YIN7 160 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 CST9Q5W186 159 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 USP42Q9H9J4 1324 aaKnown RBP11.04□□□□□ -0.64
CLDND1-214ENST00000507411 COL6A3P12111 3177 aa11.04□□□□□ -0.64
CLDND1-214ENST00000507411 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
CLDND1-214ENST00000507411 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
CLDND1-214ENST00000507411 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
CLDND1-214ENST00000507411 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
CLDND1-214ENST00000507411 MKI67P46013 3256 aaKnown RBP11.03□□□□□ -0.64
CLDND1-214ENST00000507411 MAP3K19Q56UN5 1328 aa11.03□□□□□ -0.64
CLDND1-214ENST00000507411 RNF123Q5XPI4 1314 aa11.03□□□□□ -0.64
CLDND1-214ENST00000507411 MON2Q7Z3U7 1717 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 TM4SF1P30408 202 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 HOXC9P31274 260 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 AMPHP49418 695 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 SAPCD2Q86UD0 394 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 KDRP35968 1356 aa11.02□□□□□ -0.65
CLDND1-214ENST00000507411 TRAF5O00463 557 aa11.01□□□□□ -0.65
CLDND1-214ENST00000507411 NOGQ13253 232 aa11.01□□□□□ -0.65
CLDND1-214ENST00000507411 AKAP4Q5JQC9 854 aa11.01□□□□□ -0.65
CLDND1-214ENST00000507411 HHIPL1Q96JK4 782 aa11.01□□□□□ -0.65
CLDND1-214ENST00000507411 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
CLDND1-214ENST00000507411 SAGE1Q9NXZ1 904 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms