RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ATXN7O15265 892 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 ADAM23O75077 832 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 ARSJQ5FYB0 599 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 NLRP8Q86W28 1048 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 C1orf216Q8TAB5 229 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 ARXQ96QS3 562 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 SUV39H2Q9H5I1 410 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 USP3Q9Y6I4 520 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 A6NJY4 79 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 ARAFP10398 606 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 EPXP11678 715 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 HOXB4P17483 251 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 SOX11P35716 441 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 MCM6Q14566 821 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 BTBD6Q96KE9 485 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 CABP1Q9NZU7 370 aa6.49□□□□□ -1.37
HMGB3P15-201ENST00000507326 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 TATP17735 454 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 CD33P20138 364 aa6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 NBPF1Q3BBV0 1214 aa6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 ZNF295-AS1Q8N0V1 137 aa6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P15-201ENST00000507326 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 SKIP12755 728 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 BAG6P46379 1132 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 TNP2Q05952 138 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 MTFR1Q15390 333 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 ALYREFQ86V81 257 aaKnown RBP6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 ZIC5Q96T25 663 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 HCN2Q9UL51 889 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 GJA3Q9Y6H8 435 aa6.47□□□□□ -1.37
HMGB3P15-201ENST00000507326 GNB5O14775 395 aa6.46□□□□□ -1.38
HMGB3P15-201ENST00000507326 EML3Q32P44 896 aa6.46□□□□□ -1.38
HMGB3P15-201ENST00000507326 ZDHHC3Q9NYG2 299 aa6.46□□□□□ -1.38
HMGB3P15-201ENST00000507326 KLF15Q9UIH9 416 aa6.46□□□□□ -1.38
HMGB3P15-201ENST00000507326 COG6Q9Y2V7 657 aa6.46□□□□□ -1.38
HMGB3P15-201ENST00000507326 K7ELQ4 463 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 PRKCSHP14314 528 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 ADH6P28332 368 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 DGKGP49619 791 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 GTF2IP78347 998 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 PSME1Q06323 249 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 BICDL1Q6ZP65 573 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 FCHSD1Q86WN1 690 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 NOD1Q9Y239 953 aa6.45□□□□□ -1.38
HMGB3P15-201ENST00000507326 PIK3R2O00459 728 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 BACH1O14867 736 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 FURINP09958 794 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 FAM157BP0CG42 384 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 PCBP4P57723 403 aaKnown RBP6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 FAM182BQ5T319 152 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB3P15-201ENST00000507326 TXLNAP40222 546 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 NCOA4Q13772 614 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 ZDHHC1Q8WTX9 485 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 STRN4Q9NRL3 753 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 ZNF358Q9NW07 568 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 PRR12Q9ULL5 1215 aa6.43□□□□□ -1.38
HMGB3P15-201ENST00000507326 C1QTNF9BB2RNN3 333 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 RANGAP1P46060 587 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 TBCELQ5QJ74 424 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 POM121Q96HA1 1249 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 ALG2Q9H553 416 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 AVENQ9NQS1 362 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 NOP53Q9NZM5 478 aaKnown RBP6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 MARK1Q9P0L2 795 aa6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 SCHIP1Q9P0W5 487 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P15-201ENST00000507326 USP17L5A8MUK1 530 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 CHRNA4P43681 627 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 SAMD5Q5TGI4 173 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 ZNF468Q5VIY5 522 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 SLC9A9Q8IVB4 645 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 WWC1Q8IX03 1113 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 L3MBTL2Q969R5 705 aa6.41□□□□□ -1.38
HMGB3P15-201ENST00000507326 EFSO43281 561 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 TEAD4Q15561 434 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 XP32Q5T750 250 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 LRRC69Q6ZNQ3 347 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 TNS4Q8IZW8 715 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 ZNF232Q9UNY5 417 aa6.4□□□□□ -1.38
HMGB3P15-201ENST00000507326 NOS2P35228 1153 aa6.39□□□□□ -1.39
HMGB3P15-201ENST00000507326 EPHA4P54764 986 aa6.39□□□□□ -1.39
HMGB3P15-201ENST00000507326 LAMC2Q13753 1193 aa6.39□□□□□ -1.39
HMGB3P15-201ENST00000507326 TRIM11Q96F44 468 aa6.39□□□□□ -1.39
HMGB3P15-201ENST00000507326 NEUROD4Q9HD90 331 aa6.39□□□□□ -1.39
HMGB3P15-201ENST00000507326 EML1O00423 815 aa6.38□□□□□ -1.39
HMGB3P15-201ENST00000507326 SH3PXD2AQ5TCZ1 1133 aa6.38□□□□□ -1.39
HMGB3P15-201ENST00000507326 SYT9Q86SS6 491 aa6.38□□□□□ -1.39
HMGB3P15-201ENST00000507326 TPCN2Q8NHX9 752 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms