RNA–Protein interactions for RNA: ENST00000507313.5

LINC00939-202, long intergenic non-protein coding RNA 939, humanhuman

TSL 2 BASIC

Gene LINC00939, Length 2,819 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-202ENST00000507313 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
LINC00939-202ENST00000507313 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
LINC00939-202ENST00000507313 ZNF496Q96IT1 587 aaPredicted RBP11.35□□□□□ -0.59
LINC00939-202ENST00000507313 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
LINC00939-202ENST00000507313 GSE1Q14687 1217 aa11.34□□□□□ -0.59
LINC00939-202ENST00000507313 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
LINC00939-202ENST00000507313 ITPK1Q13572 414 aa11.34□□□□□ -0.59
LINC00939-202ENST00000507313 CEMIPQ8WUJ3 1361 aa11.33□□□□□ -0.6
LINC00939-202ENST00000507313 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
LINC00939-202ENST00000507313 TFCP2L1Q9NZI6 479 aa11.33□□□□□ -0.6
LINC00939-202ENST00000507313 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
LINC00939-202ENST00000507313 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
LINC00939-202ENST00000507313 WWC1Q8IX03 1113 aa11.32□□□□□ -0.6
LINC00939-202ENST00000507313 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
LINC00939-202ENST00000507313 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
LINC00939-202ENST00000507313 FRAT1Q92837 279 aaPredicted RBP11.32□□□□□ -0.6
LINC00939-202ENST00000507313 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
LINC00939-202ENST00000507313 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 PHF14O94880 888 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
LINC00939-202ENST00000507313 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
LINC00939-202ENST00000507313 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
LINC00939-202ENST00000507313 RGS3P49796 1198 aa11.3□□□□□ -0.6
LINC00939-202ENST00000507313 CHL1O00533 1208 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 CANXP27824 592 aaKnown RBP11.29□□□□□ -0.6
LINC00939-202ENST00000507313 C8orf34Q49A92 452 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 AMIGO3Q86WK7 504 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 AK7Q96M32 723 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 GNPATO15228 680 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
LINC00939-202ENST00000507313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00939-202ENST00000507313 CENPQQ7L2Z9 268 aaPredicted RBP11.29□□□□□ -0.6
LINC00939-202ENST00000507313 TSR2Q969E8 191 aaKnown RBP11.29□□□□□ -0.6
LINC00939-202ENST00000507313 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
LINC00939-202ENST00000507313 A1BGP04217 495 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
LINC00939-202ENST00000507313 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
LINC00939-202ENST00000507313 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
LINC00939-202ENST00000507313 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 MBIPQ9NS73 344 aa11.28□□□□□ -0.6
LINC00939-202ENST00000507313 STARD3NLO95772 234 aa11.27□□□□□ -0.6
LINC00939-202ENST00000507313 NGEFQ8N5V2 710 aa11.27□□□□□ -0.6
LINC00939-202ENST00000507313 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.6
LINC00939-202ENST00000507313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.27□□□□□ -0.61
LINC00939-202ENST00000507313 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
LINC00939-202ENST00000507313 CYP19A1P11511 503 aaPredicted RBP11.27□□□□□ -0.61
LINC00939-202ENST00000507313 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.61
LINC00939-202ENST00000507313 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
LINC00939-202ENST00000507313 ZBTB7AO95365 584 aa11.27□□□□□ -0.61
LINC00939-202ENST00000507313 GNAI1P63096 354 aa11.27□□□□□ -0.61
LINC00939-202ENST00000507313 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
LINC00939-202ENST00000507313 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
LINC00939-202ENST00000507313 CCDC27Q2M243 656 aa11.26□□□□□ -0.61
LINC00939-202ENST00000507313 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
LINC00939-202ENST00000507313 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
LINC00939-202ENST00000507313 INTS5Q6P9B9 1019 aaKnown RBP11.26□□□□□ -0.61
LINC00939-202ENST00000507313 COL23A1Q86Y22 540 aaPredicted RBP11.26□□□□□ -0.61
LINC00939-202ENST00000507313 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
LINC00939-202ENST00000507313 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 DOT1LQ8TEK3 1739 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 ZNF853P0CG23 659 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
LINC00939-202ENST00000507313 CCDC87Q9NVE4 849 aa11.25□□□□□ -0.61
LINC00939-202ENST00000507313 C8orf58Q8NAV2 365 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
LINC00939-202ENST00000507313 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 ANXA1P04083 346 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 MYL6BP14649 208 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 MSL1Q68DK7 614 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 GOLGB1Q14789 3259 aaKnown RBP11.24□□□□□ -0.61
LINC00939-202ENST00000507313 TOGARAM1Q9Y4F4 1720 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 PNPLA7Q6ZV29 1317 aa11.24□□□□□ -0.61
LINC00939-202ENST00000507313 BTAF1O14981 1849 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 RFC4P35249 363 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
LINC00939-202ENST00000507313 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
LINC00939-202ENST00000507313 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
LINC00939-202ENST00000507313 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.22□□□□□ -0.61
LINC00939-202ENST00000507313 SRP68Q9UHB9 627 aaKnown RBP11.22□□□□□ -0.61
LINC00939-202ENST00000507313 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
LINC00939-202ENST00000507313 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
LINC00939-202ENST00000507313 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms