RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
DDX41-206ENST00000506965 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
DDX41-206ENST00000506965 ARHGAP27Q6ZUM4 889 aa18.28■□□□□ 0.52
DDX41-206ENST00000506965 COL11A2P13942 1736 aaPredicted RBP18.27■□□□□ 0.52
DDX41-206ENST00000506965 PRELPP51888 382 aa18.27■□□□□ 0.52
DDX41-206ENST00000506965 ZBTB1Q9Y2K1 713 aa18.27■□□□□ 0.52
DDX41-206ENST00000506965 SCN7AQ01118 1682 aa18.26■□□□□ 0.51
DDX41-206ENST00000506965 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
DDX41-206ENST00000506965 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
DDX41-206ENST00000506965 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
DDX41-206ENST00000506965 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
DDX41-206ENST00000506965 NFIXQ14938 502 aa18.24■□□□□ 0.51
DDX41-206ENST00000506965 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
DDX41-206ENST00000506965 COL15A1P39059 1388 aa18.24■□□□□ 0.51
DDX41-206ENST00000506965 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
DDX41-206ENST00000506965 CACNA1SQ13698 1873 aa18.23■□□□□ 0.51
DDX41-206ENST00000506965 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
DDX41-206ENST00000506965 DNAJC5GQ8N7S2 189 aa18.23■□□□□ 0.51
DDX41-206ENST00000506965 PCNTO95613 3336 aa18.23■□□□□ 0.51
DDX41-206ENST00000506965 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
DDX41-206ENST00000506965 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
DDX41-206ENST00000506965 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
DDX41-206ENST00000506965 TOMM70O94826 608 aa18.2■□□□□ 0.5
DDX41-206ENST00000506965 HTRA3P83110 453 aa18.2■□□□□ 0.5
DDX41-206ENST00000506965 RASSF7Q02833 373 aa18.2■□□□□ 0.5
DDX41-206ENST00000506965 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
DDX41-206ENST00000506965 FER1L6Q2WGJ9 1857 aa18.2■□□□□ 0.5
DDX41-206ENST00000506965 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
DDX41-206ENST00000506965 IL17REQ8NFR9 667 aa18.19■□□□□ 0.5
DDX41-206ENST00000506965 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
DDX41-206ENST00000506965 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
DDX41-206ENST00000506965 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
DDX41-206ENST00000506965 RNF181Q9P0P0 153 aa18.17■□□□□ 0.5
DDX41-206ENST00000506965 ZPR1O75312 459 aa18.16■□□□□ 0.5
DDX41-206ENST00000506965 EIF5P55010 431 aaKnown RBP18.16■□□□□ 0.5
DDX41-206ENST00000506965 SLX4Q8IY92 1834 aa18.16■□□□□ 0.5
DDX41-206ENST00000506965 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
DDX41-206ENST00000506965 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
DDX41-206ENST00000506965 KCNQ3O43525 872 aa18.15■□□□□ 0.5
DDX41-206ENST00000506965 SERPINB2P05120 415 aa18.15■□□□□ 0.5
DDX41-206ENST00000506965 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
DDX41-206ENST00000506965 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
DDX41-206ENST00000506965 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
DDX41-206ENST00000506965 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
DDX41-206ENST00000506965 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
DDX41-206ENST00000506965 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
DDX41-206ENST00000506965 NFKBIEO00221 500 aa18.13■□□□□ 0.49
DDX41-206ENST00000506965 APLP1P51693 650 aa18.13■□□□□ 0.49
DDX41-206ENST00000506965 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
DDX41-206ENST00000506965 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
DDX41-206ENST00000506965 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
DDX41-206ENST00000506965 DLG5Q8TDM6 1919 aa18.12■□□□□ 0.49
DDX41-206ENST00000506965 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
DDX41-206ENST00000506965 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
DDX41-206ENST00000506965 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
DDX41-206ENST00000506965 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
DDX41-206ENST00000506965 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
DDX41-206ENST00000506965 POTECB2RU33 542 aa18.09■□□□□ 0.49
DDX41-206ENST00000506965 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
DDX41-206ENST00000506965 A1BGP04217 495 aa18.09■□□□□ 0.49
DDX41-206ENST00000506965 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
DDX41-206ENST00000506965 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
DDX41-206ENST00000506965 TBC1D2BQ9UPU7 963 aa18.09■□□□□ 0.49
DDX41-206ENST00000506965 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
DDX41-206ENST00000506965 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
DDX41-206ENST00000506965 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
DDX41-206ENST00000506965 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
DDX41-206ENST00000506965 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
DDX41-206ENST00000506965 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
DDX41-206ENST00000506965 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
DDX41-206ENST00000506965 LAMB4A4D0S4 1761 aa18.06■□□□□ 0.48
DDX41-206ENST00000506965 STARD3NLO95772 234 aa18.05■□□□□ 0.48
DDX41-206ENST00000506965 LMNB1P20700 586 aa18.05■□□□□ 0.48
DDX41-206ENST00000506965 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
DDX41-206ENST00000506965 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
DDX41-206ENST00000506965 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
DDX41-206ENST00000506965 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
DDX41-206ENST00000506965 TEFQ10587 303 aa18.04■□□□□ 0.48
DDX41-206ENST00000506965 FSTL1Q12841 308 aa18.04■□□□□ 0.48
DDX41-206ENST00000506965 KLRG1Q96E93 195 aa18.04■□□□□ 0.48
DDX41-206ENST00000506965 GLTPD2A6NH11 291 aa18.03■□□□□ 0.48
DDX41-206ENST00000506965 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
DDX41-206ENST00000506965 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
DDX41-206ENST00000506965 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
DDX41-206ENST00000506965 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
DDX41-206ENST00000506965 H0YIN7 160 aa18.02■□□□□ 0.48
DDX41-206ENST00000506965 DCTN1Q14203 1278 aa18.02■□□□□ 0.48
DDX41-206ENST00000506965 NUP98P52948 1817 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 C21orf2O43822 256 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
DDX41-206ENST00000506965 MCM10Q7L590 875 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
DDX41-206ENST00000506965 A0A087WZG4 1122 aa18■□□□□ 0.47
DDX41-206ENST00000506965 BTBD11A6QL63 1104 aa18■□□□□ 0.47
DDX41-206ENST00000506965 PPP2R1AP30153 589 aa18■□□□□ 0.47
DDX41-206ENST00000506965 C16orf71Q8IYS4 520 aaPredicted RBP18■□□□□ 0.47
DDX41-206ENST00000506965 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.471e-8■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms