RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
CLCN3-205ENST00000506924 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-205ENST00000506924 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
CLCN3-205ENST00000506924 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
CLCN3-205ENST00000506924 APLP1P51693 650 aa13.25□□□□□ -0.29
CLCN3-205ENST00000506924 FUT2Q10981 343 aa13.25□□□□□ -0.29
CLCN3-205ENST00000506924 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-205ENST00000506924 C8orf37Q96NL8 207 aa13.25□□□□□ -0.29
CLCN3-205ENST00000506924 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-205ENST00000506924 HSPA5P11021 654 aaKnown RBP13.24□□□□□ -0.29
CLCN3-205ENST00000506924 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
CLCN3-205ENST00000506924 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
CLCN3-205ENST00000506924 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-205ENST00000506924 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
CLCN3-205ENST00000506924 MOXD2PA6NHM9 499 aa13.23□□□□□ -0.29
CLCN3-205ENST00000506924 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
CLCN3-205ENST00000506924 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
CLCN3-205ENST00000506924 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLCN3-205ENST00000506924 TMF1P82094 1093 aa13.22□□□□□ -0.29
CLCN3-205ENST00000506924 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
CLCN3-205ENST00000506924 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 MORN1Q5T089 497 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLCN3-205ENST00000506924 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
CLCN3-205ENST00000506924 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
CLCN3-205ENST00000506924 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
CLCN3-205ENST00000506924 USP6P35125 1406 aa13.2□□□□□ -0.3
CLCN3-205ENST00000506924 AFF2P51816 1311 aa13.19□□□□□ -0.3
CLCN3-205ENST00000506924 FDX1P10109 184 aa13.19□□□□□ -0.3
CLCN3-205ENST00000506924 PTPN5P54829 565 aa13.19□□□□□ -0.3
CLCN3-205ENST00000506924 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
CLCN3-205ENST00000506924 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
CLCN3-205ENST00000506924 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
CLCN3-205ENST00000506924 AKAP12Q02952 1782 aa13.18□□□□□ -0.3
CLCN3-205ENST00000506924 NR1I2O75469 434 aa13.18□□□□□ -0.3
CLCN3-205ENST00000506924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLCN3-205ENST00000506924 POLR3EQ9NVU0 708 aa13.18□□□□□ -0.3
CLCN3-205ENST00000506924 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
CLCN3-205ENST00000506924 ABCA3Q99758 1704 aa13.17□□□□□ -0.3
CLCN3-205ENST00000506924 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
CLCN3-205ENST00000506924 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
CLCN3-205ENST00000506924 Q3C1V9 767 aa13.17□□□□□ -0.3
CLCN3-205ENST00000506924 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-205ENST00000506924 LIMD1Q9UGP4 676 aa13.17□□□□□ -0.3
CLCN3-205ENST00000506924 TTC21BQ7Z4L5 1316 aa13.16□□□□□ -0.3
CLCN3-205ENST00000506924 NDUFV2P19404 249 aa13.16□□□□□ -0.3
CLCN3-205ENST00000506924 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
CLCN3-205ENST00000506924 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
CLCN3-205ENST00000506924 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-205ENST00000506924 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
CLCN3-205ENST00000506924 CDCA8Q53HL2 280 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 USP21Q9UK80 565 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
CLCN3-205ENST00000506924 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
CLCN3-205ENST00000506924 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
CLCN3-205ENST00000506924 ZNF772Q68DY9 489 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-205ENST00000506924 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
CLCN3-205ENST00000506924 NME9Q86XW9 330 aa13.14□□□□□ -0.31
CLCN3-205ENST00000506924 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
CLCN3-205ENST00000506924 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 PIK3C2AO00443 1686 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 LILRB3O75022 631 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
CLCN3-205ENST00000506924 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
CLCN3-205ENST00000506924 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
CLCN3-205ENST00000506924 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
CLCN3-205ENST00000506924 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
CLCN3-205ENST00000506924 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
CLCN3-205ENST00000506924 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
CLCN3-205ENST00000506924 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
CLCN3-205ENST00000506924 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 NINLQ9Y2I6 1382 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 GCP02774 474 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 MTMR2Q13614 643 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 MYOM1P52179 1685 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 USP19O94966 1318 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
CLCN3-205ENST00000506924 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
CLCN3-205ENST00000506924 HLA-CQ95604 372 aa13.1□□□□□ -0.31
CLCN3-205ENST00000506924 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
CLCN3-205ENST00000506924 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
CLCN3-205ENST00000506924 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
CLCN3-205ENST00000506924 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
CLCN3-205ENST00000506924 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
CLCN3-205ENST00000506924 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
CLCN3-205ENST00000506924 RXRBP28702 533 aa13.09□□□□□ -0.31
CLCN3-205ENST00000506924 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
CLCN3-205ENST00000506924 MTRQ99707 1265 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms