RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
HERC6-206ENST00000506714 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
HERC6-206ENST00000506714 R3HCC1Q9Y3T6 440 aaKnown RBP18.19■□□□□ 0.5
HERC6-206ENST00000506714 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
HERC6-206ENST00000506714 TCHHQ07283 1943 aa18.19■□□□□ 0.5
HERC6-206ENST00000506714 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 FAM184AQ8NB25 1140 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 CHAMP1Q96JM3 812 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 PLEKHG5O94827 1062 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 HSPA4P34932 840 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 UVSSAQ2YD98 709 aa18.18■□□□□ 0.5
HERC6-206ENST00000506714 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
HERC6-206ENST00000506714 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
HERC6-206ENST00000506714 KLHL34Q8N239 644 aa18.16■□□□□ 0.5
HERC6-206ENST00000506714 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
HERC6-206ENST00000506714 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
HERC6-206ENST00000506714 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
HERC6-206ENST00000506714 EYA1Q99502 592 aa18.16■□□□□ 0.5
HERC6-206ENST00000506714 NWD1Q149M9 1564 aa18.16■□□□□ 0.5
HERC6-206ENST00000506714 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
HERC6-206ENST00000506714 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
HERC6-206ENST00000506714 AMPHP49418 695 aa18.15■□□□□ 0.5
HERC6-206ENST00000506714 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
HERC6-206ENST00000506714 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
HERC6-206ENST00000506714 RNF214Q8ND24 703 aa18.15■□□□□ 0.5
HERC6-206ENST00000506714 SOX12O15370 315 aa18.14■□□□□ 0.49
HERC6-206ENST00000506714 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
HERC6-206ENST00000506714 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
HERC6-206ENST00000506714 USP44Q9H0E7 712 aa18.14■□□□□ 0.49
HERC6-206ENST00000506714 PTMAP06454 111 aaKnown RBP18.14■□□□□ 0.49
HERC6-206ENST00000506714 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
HERC6-206ENST00000506714 DYNC1I1O14576 645 aa18.13■□□□□ 0.49
HERC6-206ENST00000506714 MTERF4Q7Z6M4 381 aaKnown RBP18.13■□□□□ 0.49
HERC6-206ENST00000506714 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
HERC6-206ENST00000506714 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
HERC6-206ENST00000506714 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
HERC6-206ENST00000506714 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
HERC6-206ENST00000506714 RAD50Q92878 1312 aa18.12■□□□□ 0.49
HERC6-206ENST00000506714 UQCRHLA0A096LP55 91 aa18.12■□□□□ 0.49
HERC6-206ENST00000506714 UQCRHP07919 91 aa18.12■□□□□ 0.49
HERC6-206ENST00000506714 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
HERC6-206ENST00000506714 SASS6Q6UVJ0 657 aa18.12■□□□□ 0.49
HERC6-206ENST00000506714 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 CCDC183Q5T5S1 534 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
HERC6-206ENST00000506714 ATP6V1DQ9Y5K8 247 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 SGSM2O43147 1006 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 POLA2Q14181 598 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
HERC6-206ENST00000506714 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
HERC6-206ENST00000506714 CNTROBQ8N137 903 aa18.1■□□□□ 0.49
HERC6-206ENST00000506714 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
HERC6-206ENST00000506714 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
HERC6-206ENST00000506714 RPAP1Q9BWH6 1393 aaPredicted RBP18.1■□□□□ 0.49
HERC6-206ENST00000506714 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
HERC6-206ENST00000506714 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 SURF6O75683 361 aaKnown RBP18.09■□□□□ 0.49
HERC6-206ENST00000506714 ZSCAN22P10073 491 aaPredicted RBP18.09■□□□□ 0.49
HERC6-206ENST00000506714 PI4K2BQ8TCG2 481 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 HSP90AB4PQ58FF6 505 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 TTC14Q96N46 770 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 ZMYND15Q9H091 742 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
HERC6-206ENST00000506714 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.48
HERC6-206ENST00000506714 UBE2HP62256 183 aa18.08■□□□□ 0.48
HERC6-206ENST00000506714 NECTIN2Q92692 538 aa18.08■□□□□ 0.48
HERC6-206ENST00000506714 GDPD2Q9HCC8 539 aa18.08■□□□□ 0.48
HERC6-206ENST00000506714 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
HERC6-206ENST00000506714 ADRA2BP18089 450 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 HSPA2P54652 639 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
HERC6-206ENST00000506714 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
HERC6-206ENST00000506714 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
HERC6-206ENST00000506714 IL25Q9H293 177 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 FAM13BQ9NYF5 915 aa18.07■□□□□ 0.48
HERC6-206ENST00000506714 STX6O43752 255 aa18.06■□□□□ 0.48
HERC6-206ENST00000506714 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
HERC6-206ENST00000506714 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
HERC6-206ENST00000506714 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
HERC6-206ENST00000506714 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 SMC3Q9UQE7 1217 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 TTC41PQ6P2S7 1318 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
HERC6-206ENST00000506714 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 SYT1P21579 422 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 AK2P54819 239 aa18.05■□□□□ 0.48
HERC6-206ENST00000506714 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
HERC6-206ENST00000506714 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
HERC6-206ENST00000506714 F13A1P00488 732 aa18.04■□□□□ 0.48
HERC6-206ENST00000506714 HOXC9P31274 260 aa18.04■□□□□ 0.48
HERC6-206ENST00000506714 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
HERC6-206ENST00000506714 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
HERC6-206ENST00000506714 HOXB7P09629 217 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms