RNA–Protein interactions for RNA: ENST00000506649.5

CD164-208, Transcript of CD164 molecule, humanhuman

TSL 3

Gene CD164, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-208ENST00000506649 TEX13AQ9BXU3 409 aaPredicted RBP28.48■■■□□ 2.15
CD164-208ENST00000506649 COL15A1P39059 1388 aa28.48■■■□□ 2.15
CD164-208ENST00000506649 IL17REQ8NFR9 667 aa28.47■■■□□ 2.15
CD164-208ENST00000506649 ZBTB1Q9Y2K1 713 aa28.47■■■□□ 2.15
CD164-208ENST00000506649 VIRMAQ69YN4 1812 aaKnown RBP28.47■■■□□ 2.15
CD164-208ENST00000506649 KCNA3P22001 575 aa28.46■■■□□ 2.15
CD164-208ENST00000506649 ZNF790Q6PG37 636 aa28.45■■■□□ 2.14
CD164-208ENST00000506649 ARHGAP27Q6ZUM4 889 aa28.45■■■□□ 2.14
CD164-208ENST00000506649 A0A087WZG4 1122 aa28.44■■■□□ 2.14
CD164-208ENST00000506649 ZNF526Q8TF50 670 aaPredicted RBP28.44■■■□□ 2.14
CD164-208ENST00000506649 UBR2Q8IWV8 1755 aa28.43■■■□□ 2.14
CD164-208ENST00000506649 PRKAR2BP31323 418 aa28.43■■■□□ 2.14
CD164-208ENST00000506649 DALRD3Q5D0E6 543 aaKnown RBP28.43■■■□□ 2.14
CD164-208ENST00000506649 RSPH6AQ9H0K4 717 aa28.43■■■□□ 2.14
CD164-208ENST00000506649 CEMIPQ8WUJ3 1361 aa28.42■■■□□ 2.14
CD164-208ENST00000506649 PPP2R1AP30153 589 aa28.42■■■□□ 2.14
CD164-208ENST00000506649 HEG1Q9ULI3 1381 aa28.41■■■□□ 2.14
CD164-208ENST00000506649 CANXP27824 592 aaKnown RBP28.41■■■□□ 2.14
CD164-208ENST00000506649 NFIXQ14938 502 aa28.41■■■□□ 2.14
CD164-208ENST00000506649 ZNF496Q96IT1 587 aaPredicted RBP28.41■■■□□ 2.14
CD164-208ENST00000506649 EIF5P55010 431 aaKnown RBP28.4■■■□□ 2.14
CD164-208ENST00000506649 FMNL2Q96PY5 1086 aa28.4■■■□□ 2.14
CD164-208ENST00000506649 BRCA1P38398 1863 aaKnown RBP28.4■■■□□ 2.14
CD164-208ENST00000506649 PHACTR3Q96KR7 559 aa28.39■■■□□ 2.14
CD164-208ENST00000506649 U2AF1L5P0DN76 240 aaPredicted RBP28.38■■■□□ 2.13
CD164-208ENST00000506649 U2AF1Q01081 240 aaKnown RBP eCLIP28.38■■■□□ 2.131e-23■■■□□ 16
CD164-208ENST00000506649 BCL2L12Q9HB09 334 aa28.38■■■□□ 2.13
CD164-208ENST00000506649 BTBD11A6QL63 1104 aa28.36■■■□□ 2.13
CD164-208ENST00000506649 SERPINB2P05120 415 aa28.36■■■□□ 2.13
CD164-208ENST00000506649 CHRNA5P30532 468 aa28.36■■■□□ 2.13
CD164-208ENST00000506649 ARFGEF1Q9Y6D6 1849 aa28.36■■■□□ 2.13
CD164-208ENST00000506649 IL6STP40189 918 aaPredicted RBP28.35■■■□□ 2.13
CD164-208ENST00000506649 RTF1Q92541 710 aaKnown RBP28.35■■■□□ 2.13
CD164-208ENST00000506649 KIF3CO14782 793 aa28.34■■■□□ 2.13
CD164-208ENST00000506649 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
CD164-208ENST00000506649 SIPA1L3O60292 1781 aaPredicted RBP28.34■■■□□ 2.13
CD164-208ENST00000506649 HTATSF1O43719 755 aaKnown RBP28.32■■■□□ 2.12
CD164-208ENST00000506649 C9orf131Q5VYM1 1079 aa28.32■■■□□ 2.12
CD164-208ENST00000506649 NRXN2Q9P2S2 1712 aa28.32■■■□□ 2.12
CD164-208ENST00000506649 HSPA6P17066 643 aa28.31■■■□□ 2.12
CD164-208ENST00000506649 PDZRN3Q9UPQ7 1066 aa28.3■■■□□ 2.12
CD164-208ENST00000506649 AFDNP55196 1824 aaKnown RBP28.27■■■□□ 2.12
CD164-208ENST00000506649 BICDL1Q6ZP65 573 aa28.27■■■□□ 2.12
CD164-208ENST00000506649 TTLL6Q8N841 843 aa28.27■■■□□ 2.12
CD164-208ENST00000506649 ZNF330Q9Y3S2 320 aaPredicted RBP28.27■■■□□ 2.12
CD164-208ENST00000506649 H0YIN7 160 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 TOMM70O94826 608 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 A1BGP04217 495 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 NEFMP07197 916 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 TBC1D9BQ66K14 1250 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 RNF181Q9P0P0 153 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 TBC1D2BQ9UPU7 963 aa28.26■■■□□ 2.11
CD164-208ENST00000506649 KCNQ3O43525 872 aa28.25■■■□□ 2.11
CD164-208ENST00000506649 SNRPA1P09661 255 aaKnown RBP28.25■■■□□ 2.11
CD164-208ENST00000506649 MCM10Q7L590 875 aa28.25■■■□□ 2.11
CD164-208ENST00000506649 C2CD5Q86YS7 1000 aa28.25■■■□□ 2.11
CD164-208ENST00000506649 CARMIL3Q8ND23 1372 aa28.24■■■□□ 2.11
CD164-208ENST00000506649 KDM2BQ8NHM5 1336 aa28.23■■■□□ 2.11
CD164-208ENST00000506649 ZC3H4Q9UPT8 1303 aaKnown RBP28.23■■■□□ 2.11
CD164-208ENST00000506649 PDE6BP35913 854 aa28.23■■■□□ 2.11
CD164-208ENST00000506649 BRIP1Q9BX63 1249 aa28.23■■■□□ 2.11
CD164-208ENST00000506649 USP16Q9Y5T5 823 aa28.23■■■□□ 2.11
CD164-208ENST00000506649 CAMTA2O94983 1202 aa28.22■■■□□ 2.11
CD164-208ENST00000506649 SETDB2Q96T68 719 aa28.22■■■□□ 2.11
CD164-208ENST00000506649 SCN7AQ01118 1682 aa28.22■■■□□ 2.11
CD164-208ENST00000506649 DZIP3Q86Y13 1208 aaKnown RBP28.21■■■□□ 2.11
CD164-208ENST00000506649 NMRK2Q9NPI5 230 aa28.21■■■□□ 2.11
CD164-208ENST00000506649 TAF7Q15545 349 aaPredicted RBP28.2■■■□□ 2.1
CD164-208ENST00000506649 CLEC4GQ6UXB4 293 aa28.2■■■□□ 2.1
CD164-208ENST00000506649 DLEC1Q9Y238 1755 aa28.19■■■□□ 2.1
CD164-208ENST00000506649 RGL2O15211 777 aa28.19■■■□□ 2.1
CD164-208ENST00000506649 PRR5LQ6MZQ0 368 aa28.19■■■□□ 2.1
CD164-208ENST00000506649 PNNQ9H307 717 aaKnown RBP28.19■■■□□ 2.1
CD164-208ENST00000506649 LMNB1P20700 586 aa28.18■■■□□ 2.1
CD164-208ENST00000506649 C16orf71Q8IYS4 520 aaPredicted RBP28.18■■■□□ 2.1
CD164-208ENST00000506649 DCTN1Q14203 1278 aa28.17■■■□□ 2.1
CD164-208ENST00000506649 CNBD1Q8NA66 436 aa28.17■■■□□ 2.1
CD164-208ENST00000506649 RBM46Q8TBY0 533 aaKnown RBP28.17■■■□□ 2.1
CD164-208ENST00000506649 PNISRQ8TF01 805 aaKnown RBP28.17■■■□□ 2.1
CD164-208ENST00000506649 ZNF652Q9Y2D9 606 aa28.17■■■□□ 2.1
CD164-208ENST00000506649 NPHP1O15259 732 aa28.16■■■□□ 2.1
CD164-208ENST00000506649 APLP1P51693 650 aa28.15■■■□□ 2.1
CD164-208ENST00000506649 ST5P78524 1137 aa28.15■■■□□ 2.1
CD164-208ENST00000506649 ZNF622Q969S3 477 aaKnown RBP eCLIP28.15■■■□□ 2.1
CD164-208ENST00000506649 PRAMEF22A3QJZ6 481 aa28.14■■■□□ 2.1
CD164-208ENST00000506649 RASSF7Q02833 373 aa28.14■■■□□ 2.1
CD164-208ENST00000506649 CEP350Q5VT06 3117 aa28.14■■■□□ 2.09
CD164-208ENST00000506649 SBF1O95248 1867 aa28.13■■■□□ 2.09
CD164-208ENST00000506649 PLEKHF1Q96S99 279 aa28.12■■■□□ 2.09
CD164-208ENST00000506649 FSTL1Q12841 308 aa28.11■■■□□ 2.09
CD164-208ENST00000506649 STYK1Q6J9G0 422 aa28.11■■■□□ 2.09
CD164-208ENST00000506649 CNKSR1Q969H4 720 aa28.11■■■□□ 2.09
CD164-208ENST00000506649 BCORQ6W2J9 1755 aa28.1■■■□□ 2.09
CD164-208ENST00000506649 PIP4K2AP48426 406 aaPredicted RBP28.1■■■□□ 2.09
CD164-208ENST00000506649 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
CD164-208ENST00000506649 NBPF26B4DH59 902 aa28.09■■■□□ 2.09
CD164-208ENST00000506649 DDX10Q13206 875 aaKnown RBP28.09■■■□□ 2.09
CD164-208ENST00000506649 NBPF10Q6P3W6 841 aaKnown RBP28.09■■■□□ 2.09
CD164-208ENST00000506649 NBPF5PQ86XG9 351 aaPredicted RBP28.09■■■□□ 2.09
CD164-208ENST00000506649 NBPF15Q8N660 670 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms