RNA–Protein interactions for RNA: ENST00000506590.1

CXCL13-202, Transcript of C-X-C motif chemokine ligand 13, humanhuman

TSL 2

Gene CXCL13, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-202ENST00000506590 TOM1O60784 492 aa6.59□□□□□ -1.35
CXCL13-202ENST00000506590 PPP1R15AO75807 674 aaPredicted RBP6.59□□□□□ -1.35
CXCL13-202ENST00000506590 HDGFL1Q5TGJ6 251 aa6.59□□□□□ -1.35
CXCL13-202ENST00000506590 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
CXCL13-202ENST00000506590 J3QL48 77 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 ALDH1A1P00352 501 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
CXCL13-202ENST00000506590 LTKP29376 864 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 C1QTNF2Q9BXJ5 285 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 LMTK2Q8IWU2 1503 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 IQSEC2Q5JU85 1478 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 LTBP4Q8N2S1 1624 aa6.58□□□□□ -1.36
CXCL13-202ENST00000506590 TMEM2Q9UHN6 1383 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 TTC24A2A3L6 582 aaPredicted RBP6.57□□□□□ -1.36
CXCL13-202ENST00000506590 PIP4K2BP78356 416 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 GLMNQ92990 594 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 TRIM52Q96A61 297 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 SLC10A4Q96EP9 437 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 GPSM3Q9Y4H4 160 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 MED14O60244 1454 aa6.57□□□□□ -1.36
CXCL13-202ENST00000506590 SCAF11Q99590 1463 aaKnown RBP6.57□□□□□ -1.36
CXCL13-202ENST00000506590 CEP152O94986 1710 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 RPRD2Q5VT52 1461 aaKnown RBP6.56□□□□□ -1.36
CXCL13-202ENST00000506590 PIK3CDO00329 1044 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 GIGYF1O75420 1035 aaPredicted RBP6.56□□□□□ -1.36
CXCL13-202ENST00000506590 SEMA3FQ13275 785 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 VASH1Q7L8A9 365 aaPredicted RBP6.56□□□□□ -1.36
CXCL13-202ENST00000506590 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.56□□□□□ -1.36
CXCL13-202ENST00000506590 PDZRN3Q9UPQ7 1066 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 DEPDC5O75140 1603 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 NOS1P29475 1434 aa6.56□□□□□ -1.36
CXCL13-202ENST00000506590 CPS1P31327 1500 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 EFCAB6Q5THR3 1501 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 EIF4G2P78344 907 aaKnown RBP eCLIP6.55□□□□□ -1.36
CXCL13-202ENST00000506590 TSGA10IPQ3SY00 556 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
CXCL13-202ENST00000506590 SLC26A8Q96RN1 970 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 ALG2Q9H553 416 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 RRBP1Q9P2E9 1410 aaKnown RBP6.55□□□□□ -1.36
CXCL13-202ENST00000506590 VWDEQ8N2E2 1590 aa6.55□□□□□ -1.36
CXCL13-202ENST00000506590 NEURL4Q96JN8 1562 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 GFRA3O60609 400 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 PDIA4P13667 645 aaKnown RBP6.54□□□□□ -1.36
CXCL13-202ENST00000506590 FSHRP23945 695 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 GRM5P41594 1212 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
CXCL13-202ENST00000506590 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
CXCL13-202ENST00000506590 KCTD15Q96SI1 283 aaPredicted RBP6.54□□□□□ -1.36
CXCL13-202ENST00000506590 CEP126Q9P2H0 1117 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 SLIT1O75093 1534 aa6.54□□□□□ -1.36
CXCL13-202ENST00000506590 ARHGAP23Q9P227 1491 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 NR3C2P08235 984 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 SMPD1P17405 629 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 KCNA6P17658 529 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 TRMT44Q8IYL2 757 aaKnown RBP6.53□□□□□ -1.36
CXCL13-202ENST00000506590 TOR4AQ9NXH8 423 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 WASF2Q9Y6W5 498 aa6.53□□□□□ -1.36
CXCL13-202ENST00000506590 POLR1AO95602 1720 aaPredicted RBP6.53□□□□□ -1.36
CXCL13-202ENST00000506590 CFAP65Q6ZU64 1925 aaKnown RBP6.52□□□□□ -1.37
CXCL13-202ENST00000506590 IQGAP1P46940 1657 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 RIMS2Q9UQ26 1411 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 PIK3C2BO00750 1634 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 FAM187AA6NFU0 413 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 RGS20O76081 388 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
CXCL13-202ENST00000506590 CDK15Q96Q40 435 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 UCN2Q96RP3 112 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 UBR1Q8IWV7 1749 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 DISP3Q9P2K9 1392 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 TET3O43151 1660 aa6.52□□□□□ -1.37
CXCL13-202ENST00000506590 NAIPQ13075 1403 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 ADGRB3O60242 1522 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 ADH1CP00326 375 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 HSPA1LP34931 641 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 NNTQ13423 1086 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 DEPDC4Q8N2C3 294 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 HPS1Q92902 700 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
CXCL13-202ENST00000506590 CDCA7Q9BWT1 371 aaPredicted RBP6.51□□□□□ -1.37
CXCL13-202ENST00000506590 TBX22Q9Y458 520 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 PLEKHG1Q9ULL1 1385 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 UNC13BO14795 1591 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 SYNMO15061 1565 aa6.51□□□□□ -1.37
CXCL13-202ENST00000506590 ACIN1Q9UKV3 1341 aaKnown RBP6.5□□□□□ -1.37
CXCL13-202ENST00000506590 HFM1A2PYH4 1435 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 TMEM94Q12767 1356 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 CDK11BP21127 795 aaKnown RBP6.5□□□□□ -1.37
CXCL13-202ENST00000506590 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 RNF135Q8IUD6 432 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 CCDC82Q8N4S0 544 aa6.5□□□□□ -1.37
CXCL13-202ENST00000506590 ESPNB1AK53 854 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms