RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
DDR1-258ENST00000506573 FKBP8Q14318 412 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 ZBTB1Q9Y2K1 713 aa20.6■□□□□ 0.89
DDR1-258ENST00000506573 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
DDR1-258ENST00000506573 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
DDR1-258ENST00000506573 MCM10Q7L590 875 aa20.58■□□□□ 0.89
DDR1-258ENST00000506573 C10orf71Q711Q0 1435 aa20.58■□□□□ 0.88
DDR1-258ENST00000506573 C4AP0C0L4 1744 aa20.57■□□□□ 0.88
DDR1-258ENST00000506573 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
DDR1-258ENST00000506573 UBR2Q8IWV8 1755 aa20.56■□□□□ 0.88
DDR1-258ENST00000506573 A0A0G2JLW4 131 aa20.55■□□□□ 0.88
DDR1-258ENST00000506573 IL6STP40189 918 aaPredicted RBP20.55■□□□□ 0.88
DDR1-258ENST00000506573 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
DDR1-258ENST00000506573 WWC3Q9ULE0 1092 aa20.55■□□□□ 0.88
DDR1-258ENST00000506573 BCS1LQ9Y276 419 aa20.55■□□□□ 0.88
DDR1-258ENST00000506573 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
DDR1-258ENST00000506573 PXDNLA1KZ92 1463 aa20.55■□□□□ 0.88
DDR1-258ENST00000506573 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
DDR1-258ENST00000506573 TM4SF1P30408 202 aa20.54■□□□□ 0.88
DDR1-258ENST00000506573 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
DDR1-258ENST00000506573 POLRMTO00411 1230 aaKnown RBP20.53■□□□□ 0.88
DDR1-258ENST00000506573 DPEP1P16444 411 aa20.53■□□□□ 0.88
DDR1-258ENST00000506573 DDR1Q08345 913 aa20.53■□□□□ 0.88
DDR1-258ENST00000506573 PIM2Q9P1W9 311 aa20.53■□□□□ 0.88
DDR1-258ENST00000506573 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
DDR1-258ENST00000506573 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
DDR1-258ENST00000506573 NFE2L2Q16236 605 aa20.52■□□□□ 0.88
DDR1-258ENST00000506573 SIPA1L3O60292 1781 aaPredicted RBP20.51■□□□□ 0.87
DDR1-258ENST00000506573 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
DDR1-258ENST00000506573 NFIXQ14938 502 aa20.51■□□□□ 0.87
DDR1-258ENST00000506573 KIF13BQ9NQT8 1826 aa20.5■□□□□ 0.87
DDR1-258ENST00000506573 DALRD3Q5D0E6 543 aaKnown RBP20.5■□□□□ 0.87
DDR1-258ENST00000506573 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
DDR1-258ENST00000506573 NPHP1O15259 732 aa20.49■□□□□ 0.87
DDR1-258ENST00000506573 KCNQ3O43525 872 aa20.49■□□□□ 0.87
DDR1-258ENST00000506573 GIGYF1O75420 1035 aaPredicted RBP20.49■□□□□ 0.87
DDR1-258ENST00000506573 A1BGP04217 495 aa20.49■□□□□ 0.87
DDR1-258ENST00000506573 SERPINB2P05120 415 aa20.49■□□□□ 0.87
DDR1-258ENST00000506573 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
DDR1-258ENST00000506573 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDR1-258ENST00000506573 ARHGAP27Q6ZUM4 889 aa20.48■□□□□ 0.87
DDR1-258ENST00000506573 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
DDR1-258ENST00000506573 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
DDR1-258ENST00000506573 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
DDR1-258ENST00000506573 PDZRN3Q9UPQ7 1066 aa20.47■□□□□ 0.87
DDR1-258ENST00000506573 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
DDR1-258ENST00000506573 SETDB2Q96T68 719 aa20.46■□□□□ 0.87
DDR1-258ENST00000506573 GPBP1L1Q9HC44 474 aaPredicted RBP20.46■□□□□ 0.87
DDR1-258ENST00000506573 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
DDR1-258ENST00000506573 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
DDR1-258ENST00000506573 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
DDR1-258ENST00000506573 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
DDR1-258ENST00000506573 H0YIN7 160 aa20.44■□□□□ 0.86
DDR1-258ENST00000506573 KCNA3P22001 575 aa20.44■□□□□ 0.86
DDR1-258ENST00000506573 RIPK4P57078 832 aa20.44■□□□□ 0.86
DDR1-258ENST00000506573 N4BP2Q86UW6 1770 aaPredicted RBP20.44■□□□□ 0.86
DDR1-258ENST00000506573 CHRNA5P30532 468 aa20.43■□□□□ 0.86
DDR1-258ENST00000506573 PDE6BP35913 854 aa20.43■□□□□ 0.86
DDR1-258ENST00000506573 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
DDR1-258ENST00000506573 CLEC4GQ6UXB4 293 aa20.43■□□□□ 0.86
DDR1-258ENST00000506573 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
DDR1-258ENST00000506573 ST5P78524 1137 aa20.42■□□□□ 0.86
DDR1-258ENST00000506573 RGL2O15211 777 aa20.41■□□□□ 0.86
DDR1-258ENST00000506573 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
DDR1-258ENST00000506573 C1QTNF8P60827 252 aa20.41■□□□□ 0.86
DDR1-258ENST00000506573 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
DDR1-258ENST00000506573 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
DDR1-258ENST00000506573 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 TTLL6Q8N841 843 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 CNBD1Q8NA66 436 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 BRIP1Q9BX63 1249 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
DDR1-258ENST00000506573 ADCY9O60503 1353 aa20.39■□□□□ 0.85
DDR1-258ENST00000506573 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
DDR1-258ENST00000506573 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
DDR1-258ENST00000506573 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
DDR1-258ENST00000506573 PIP4K2AP48426 406 aaPredicted RBP20.38■□□□□ 0.85
DDR1-258ENST00000506573 EIF4A1P60842 406 aaKnown RBP20.38■□□□□ 0.85
DDR1-258ENST00000506573 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
DDR1-258ENST00000506573 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
DDR1-258ENST00000506573 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
DDR1-258ENST00000506573 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
DDR1-258ENST00000506573 PRR5LQ6MZQ0 368 aa20.36■□□□□ 0.85
DDR1-258ENST00000506573 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
DDR1-258ENST00000506573 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
DDR1-258ENST00000506573 NBPF26B4DH59 902 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 NBPF10Q6P3W6 841 aaKnown RBP20.35■□□□□ 0.85
DDR1-258ENST00000506573 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 NBPF15Q8N660 670 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.85
DDR1-258ENST00000506573 DLG5Q8TDM6 1919 aa20.35■□□□□ 0.85
DDR1-258ENST00000506573 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
DDR1-258ENST00000506573 GTF2E1P29083 439 aaPredicted RBP20.34■□□□□ 0.85
DDR1-258ENST00000506573 C9orf131Q5VYM1 1079 aa20.34■□□□□ 0.85
DDR1-258ENST00000506573 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms