RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
AP3S1-204ENST00000506430 STARD3NLO95772 234 aa23.05■■□□□ 1.28
AP3S1-204ENST00000506430 DPEP1P16444 411 aa23.05■■□□□ 1.28
AP3S1-204ENST00000506430 TM4SF1P30408 202 aa23.05■■□□□ 1.28
AP3S1-204ENST00000506430 COL15A1P39059 1388 aa23.04■■□□□ 1.28
AP3S1-204ENST00000506430 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
AP3S1-204ENST00000506430 DCTN1Q14203 1278 aa23.04■■□□□ 1.28
AP3S1-204ENST00000506430 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
AP3S1-204ENST00000506430 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
AP3S1-204ENST00000506430 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
AP3S1-204ENST00000506430 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
AP3S1-204ENST00000506430 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
AP3S1-204ENST00000506430 SIPA1L3O60292 1781 aaPredicted RBP23.02■■□□□ 1.28
AP3S1-204ENST00000506430 KCNA3P22001 575 aa23.02■■□□□ 1.28
AP3S1-204ENST00000506430 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
AP3S1-204ENST00000506430 KIAA1551Q9HCM1 1747 aa23.02■■□□□ 1.28
AP3S1-204ENST00000506430 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
AP3S1-204ENST00000506430 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
AP3S1-204ENST00000506430 NFIXQ14938 502 aa23.01■■□□□ 1.27
AP3S1-204ENST00000506430 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
AP3S1-204ENST00000506430 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
AP3S1-204ENST00000506430 DDX10Q13206 875 aaKnown RBP22.99■■□□□ 1.27
AP3S1-204ENST00000506430 HTATSF1O43719 755 aaKnown RBP22.98■■□□□ 1.27
AP3S1-204ENST00000506430 A1BGP04217 495 aa22.98■■□□□ 1.27
AP3S1-204ENST00000506430 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
AP3S1-204ENST00000506430 ZNF330Q9Y3S2 320 aaPredicted RBP22.98■■□□□ 1.27
AP3S1-204ENST00000506430 PRAMEF22A3QJZ6 481 aa22.97■■□□□ 1.27
AP3S1-204ENST00000506430 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
AP3S1-204ENST00000506430 CHRNA5P30532 468 aa22.96■■□□□ 1.27
AP3S1-204ENST00000506430 TBC1D2BQ9UPU7 963 aa22.96■■□□□ 1.27
AP3S1-204ENST00000506430 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
AP3S1-204ENST00000506430 A0A087WZG4 1122 aa22.95■■□□□ 1.26
AP3S1-204ENST00000506430 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
AP3S1-204ENST00000506430 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
AP3S1-204ENST00000506430 SERPINB2P05120 415 aa22.94■■□□□ 1.26
AP3S1-204ENST00000506430 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
AP3S1-204ENST00000506430 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
AP3S1-204ENST00000506430 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
AP3S1-204ENST00000506430 RALBP1Q15311 655 aa22.94■■□□□ 1.26
AP3S1-204ENST00000506430 PIM2Q9P1W9 311 aa22.94■■□□□ 1.26
AP3S1-204ENST00000506430 ADCY9O60503 1353 aa22.93■■□□□ 1.26
AP3S1-204ENST00000506430 GIGYF1O75420 1035 aaPredicted RBP22.93■■□□□ 1.26
AP3S1-204ENST00000506430 NEFMP07197 916 aa22.93■■□□□ 1.26
AP3S1-204ENST00000506430 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
AP3S1-204ENST00000506430 ARHGAP27Q6ZUM4 889 aa22.93■■□□□ 1.26
AP3S1-204ENST00000506430 SNRPA1P09661 255 aaKnown RBP22.92■■□□□ 1.26
AP3S1-204ENST00000506430 TBC1D9BQ66K14 1250 aa22.92■■□□□ 1.26
AP3S1-204ENST00000506430 ZNF526Q8TF50 670 aaPredicted RBP22.92■■□□□ 1.26
AP3S1-204ENST00000506430 NFE2L2Q16236 605 aa22.9■■□□□ 1.26
AP3S1-204ENST00000506430 DALRD3Q5D0E6 543 aaKnown RBP22.9■■□□□ 1.26
AP3S1-204ENST00000506430 THUMPD2Q9BTF0 503 aaKnown RBP22.9■■□□□ 1.26
AP3S1-204ENST00000506430 GPBP1L1Q9HC44 474 aaPredicted RBP22.89■■□□□ 1.25
AP3S1-204ENST00000506430 BRCA1P38398 1863 aaKnown RBP22.89■■□□□ 1.25
AP3S1-204ENST00000506430 CAMTA2O94983 1202 aa22.88■■□□□ 1.25
AP3S1-204ENST00000506430 NPM2Q86SE8 214 aaKnown RBP22.88■■□□□ 1.25
AP3S1-204ENST00000506430 AFDNP55196 1824 aaKnown RBP22.87■■□□□ 1.25
AP3S1-204ENST00000506430 DZIP3Q86Y13 1208 aaKnown RBP22.87■■□□□ 1.25
AP3S1-204ENST00000506430 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
AP3S1-204ENST00000506430 CARMIL3Q8ND23 1372 aa22.87■■□□□ 1.25
AP3S1-204ENST00000506430 MAPK8IP3Q9UPT6 1336 aa22.86■■□□□ 1.25
AP3S1-204ENST00000506430 NBPF26B4DH59 902 aa22.86■■□□□ 1.25
AP3S1-204ENST00000506430 NBPF10Q6P3W6 841 aaKnown RBP22.86■■□□□ 1.25
AP3S1-204ENST00000506430 NBPF15Q8N660 670 aa22.86■■□□□ 1.25
AP3S1-204ENST00000506430 NRXN2Q9P2S2 1712 aa22.85■■□□□ 1.25
AP3S1-204ENST00000506430 CCDC24Q8N4L8 307 aa22.85■■□□□ 1.25
AP3S1-204ENST00000506430 DLG5Q8TDM6 1919 aa22.84■■□□□ 1.25
AP3S1-204ENST00000506430 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
AP3S1-204ENST00000506430 PRR5LQ6MZQ0 368 aa22.83■■□□□ 1.25
AP3S1-204ENST00000506430 C2CD5Q86YS7 1000 aa22.83■■□□□ 1.25
AP3S1-204ENST00000506430 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
AP3S1-204ENST00000506430 SETDB2Q96T68 719 aa22.83■■□□□ 1.25
AP3S1-204ENST00000506430 SCN7AQ01118 1682 aa22.82■■□□□ 1.24
AP3S1-204ENST00000506430 SENP3-EIF4A1A0A087X0R7 540 aa22.81■■□□□ 1.24
AP3S1-204ENST00000506430 H0YIN7 160 aa22.81■■□□□ 1.24
AP3S1-204ENST00000506430 RIPK4P57078 832 aa22.81■■□□□ 1.24
AP3S1-204ENST00000506430 EIF4A1P60842 406 aaKnown RBP22.81■■□□□ 1.24
AP3S1-204ENST00000506430 C9orf131Q5VYM1 1079 aa22.81■■□□□ 1.24
AP3S1-204ENST00000506430 ARFGEF1Q9Y6D6 1849 aa22.8■■□□□ 1.24
AP3S1-204ENST00000506430 BRIP1Q9BX63 1249 aa22.8■■□□□ 1.24
AP3S1-204ENST00000506430 CCDC146Q8IYE0 955 aa22.79■■□□□ 1.24
AP3S1-204ENST00000506430 TTLL6Q8N841 843 aa22.79■■□□□ 1.24
AP3S1-204ENST00000506430 TMPOP42166 694 aaKnown RBP22.78■■□□□ 1.24
AP3S1-204ENST00000506430 CLEC4GQ6UXB4 293 aa22.78■■□□□ 1.24
AP3S1-204ENST00000506430 RRP7AQ9Y3A4 280 aaKnown RBP22.78■■□□□ 1.24
AP3S1-204ENST00000506430 PDE6BP35913 854 aa22.77■■□□□ 1.24
AP3S1-204ENST00000506430 NGEFQ8N5V2 710 aa22.77■■□□□ 1.24
AP3S1-204ENST00000506430 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
AP3S1-204ENST00000506430 KIF3CO14782 793 aa22.76■■□□□ 1.23
AP3S1-204ENST00000506430 HLFQ16534 295 aa22.76■■□□□ 1.23
AP3S1-204ENST00000506430 ZNF622Q969S3 477 aaKnown RBP eCLIP22.76■■□□□ 1.23
AP3S1-204ENST00000506430 KDM3BQ7LBC6 1761 aa22.76■■□□□ 1.23
AP3S1-204ENST00000506430 NPHP1O15259 732 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 RASSF7Q02833 373 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 ZNF652Q9Y2D9 606 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 BCORQ6W2J9 1755 aa22.75■■□□□ 1.23
AP3S1-204ENST00000506430 PRELPP51888 382 aa22.74■■□□□ 1.23
AP3S1-204ENST00000506430 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
AP3S1-204ENST00000506430 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms