RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
SNF8-204ENST00000506104 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
SNF8-204ENST00000506104 NPHP1O15259 732 aa11.2□□□□□ -0.62
SNF8-204ENST00000506104 KCNA3P22001 575 aa11.2□□□□□ -0.62
SNF8-204ENST00000506104 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
SNF8-204ENST00000506104 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
SNF8-204ENST00000506104 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
SNF8-204ENST00000506104 POLRMTO00411 1230 aaKnown RBP11.19□□□□□ -0.62
SNF8-204ENST00000506104 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
SNF8-204ENST00000506104 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
SNF8-204ENST00000506104 SLC52A2Q9HAB3 445 aa11.19□□□□□ -0.62
SNF8-204ENST00000506104 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
SNF8-204ENST00000506104 TNRC6CQ9HCJ0 1690 aaKnown RBP11.18□□□□□ -0.62
SNF8-204ENST00000506104 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
SNF8-204ENST00000506104 IL13P35225 146 aa11.18□□□□□ -0.62
SNF8-204ENST00000506104 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
SNF8-204ENST00000506104 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
SNF8-204ENST00000506104 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
SNF8-204ENST00000506104 TTC5Q8N0Z6 440 aa11.18□□□□□ -0.62
SNF8-204ENST00000506104 COL15A1P39059 1388 aa11.17□□□□□ -0.62
SNF8-204ENST00000506104 SERPINB2P05120 415 aa11.17□□□□□ -0.62
SNF8-204ENST00000506104 NFIXQ14938 502 aa11.17□□□□□ -0.62
SNF8-204ENST00000506104 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
SNF8-204ENST00000506104 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNF8-204ENST00000506104 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
SNF8-204ENST00000506104 SOS1Q07889 1333 aaPredicted RBP11.16□□□□□ -0.62
SNF8-204ENST00000506104 U2SURPO15042 1029 aaKnown RBP11.16□□□□□ -0.62
SNF8-204ENST00000506104 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
SNF8-204ENST00000506104 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
SNF8-204ENST00000506104 NARFQ9UHQ1 456 aa11.16□□□□□ -0.62
SNF8-204ENST00000506104 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 H0YIN7 160 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
SNF8-204ENST00000506104 TM4SF1P30408 202 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 FSTL1Q12841 308 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.62
SNF8-204ENST00000506104 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 TTLL6Q8N841 843 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 KLRG1Q96E93 195 aa11.15□□□□□ -0.62
SNF8-204ENST00000506104 LMNB1P20700 586 aa11.14□□□□□ -0.63
SNF8-204ENST00000506104 TEFQ10587 303 aa11.14□□□□□ -0.63
SNF8-204ENST00000506104 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
SNF8-204ENST00000506104 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
SNF8-204ENST00000506104 STARD3NLO95772 234 aa11.13□□□□□ -0.63
SNF8-204ENST00000506104 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
SNF8-204ENST00000506104 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
SNF8-204ENST00000506104 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
SNF8-204ENST00000506104 A0A087WZG4 1122 aa11.12□□□□□ -0.63
SNF8-204ENST00000506104 C21orf2O43822 256 aa11.12□□□□□ -0.63
SNF8-204ENST00000506104 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
SNF8-204ENST00000506104 COL13A1Q5TAT6 717 aaPredicted RBP11.12□□□□□ -0.63
SNF8-204ENST00000506104 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
SNF8-204ENST00000506104 CARMIL3Q8ND23 1372 aa11.12□□□□□ -0.63
SNF8-204ENST00000506104 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
SNF8-204ENST00000506104 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
SNF8-204ENST00000506104 DPY19L2Q6NUT2 758 aa11.11□□□□□ -0.63
SNF8-204ENST00000506104 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
SNF8-204ENST00000506104 ANKRD31Q8N7Z5 1873 aa11.1□□□□□ -0.63
SNF8-204ENST00000506104 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
SNF8-204ENST00000506104 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
SNF8-204ENST00000506104 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 DICER1Q9UPY3 1922 aaKnown RBP11.09□□□□□ -0.63
SNF8-204ENST00000506104 UBR2Q8IWV8 1755 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 MRC1P22897 1456 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 GNAT3A8MTJ3 354 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 PDE6BP35913 854 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
SNF8-204ENST00000506104 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
SNF8-204ENST00000506104 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
SNF8-204ENST00000506104 A1BGP04217 495 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
SNF8-204ENST00000506104 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
SNF8-204ENST00000506104 PRELPP51888 382 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 ST5P78524 1137 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
SNF8-204ENST00000506104 COL11A2P13942 1736 aaPredicted RBP11.08□□□□□ -0.64
SNF8-204ENST00000506104 SLX4Q8IY92 1834 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 HEG1Q9ULI3 1381 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 NFKBIEO00221 500 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 EIF5P55010 431 aaKnown RBP11.07□□□□□ -0.64
SNF8-204ENST00000506104 PRR5LQ6MZQ0 368 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 FMNL2Q96PY5 1086 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 TEX13AQ9BXU3 409 aaPredicted RBP11.07□□□□□ -0.64
SNF8-204ENST00000506104 TAOK3Q9H2K8 898 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
SNF8-204ENST00000506104 SCN7AQ01118 1682 aa11.07□□□□□ -0.64
SNF8-204ENST00000506104 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
SNF8-204ENST00000506104 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 KCNQ3O43525 872 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 NBPF5PQ86XG9 351 aaPredicted RBP11.06□□□□□ -0.64
SNF8-204ENST00000506104 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
SNF8-204ENST00000506104 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms